Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90914g00003 ATGGATCACGTTATTGGTGGAAAATTCAAGCTTGGGAGAAAGATTGGAAGTGGGTCATTTGGAGAACTCTACTTGGGTGTTAATGTGCAAAGTGGAGAGGAAGTTGCTGTCAAGCTGGAATCCGTGAAGACCAAACATCCACAACTTCATTATGAGTCAAAATTGTATATGCTTCTTCAAGGCGGAACTGGTATACCCCATTTAAAATGGTTTGGAGTTGAGGGTGATTACAATGTCATGGTGATTGACCTTCTTGGACCAAGTCTGGAAGACTTATTTAACTATTGCAACAGGAAATTCTCTCTCAAAACAGTTCTGATGCTTGCAGATCAGCTACTAAACAGAGTTGAGTACATGCACTCCCGGGGTTTTCTGCACCGTGATATAAAACCCGACAACTTTTTAATGGGTTTGGGCCGCAAGGCAAATCAGGTTTACATAATTGATTATGGTCTTGCAAAAAAGTATCGTGATCTTCAAACCCATAAGCATATACCATACAGGGAAAACAAAAATCTTACTGGAACTGCACGCTATGCAAGTGTTAATACTCATCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGCTATGTGCTTATGTACTTCTTGAGAGGAAGTCTCCCTTGGCAAGGGTTGAAAGCTGGCACTAAAAAGCAGAAGTATGACAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCTTGTGCAAATCACACCCACTGGAATTCACATCCTACTTTCACTACTGCCGATCTCTACGTTTTGAAGATAAGCCTGATTATTCATATCTTAAGAGACTCTTCCGTGACCTATTCATACGAGAAGGTTATCAGTTTGACTATGTATTTGACTGGACTATATTGAAGTATCCACAAATTGGATCCAGCTCAAGAACTCGACTAACCGGGAAACCAGCTGTAAACCCAGGACTGTCAGGAGATAGATTAGATCGACCTTCAGGTGGGCCAGAGATTCGGGAAAGATTGTCAGGTGCAGTTGAGGCATTTGCAAGAAGGAATGGCTCTGGACTAAATCTGCATAGGTCTTCAGATGACGTGCCATCTTCCAAAGATGTGTTAGCTGATTCGGAGAGAACTCGAAGCTCTTCTCGCAATGGCAGTGCCTCAAAAAGGCCCGTTGTTTCGAGCAGCCGGCCAAGTTCTTCTGGTGAGCCTAGCGAGAACCGTTCAAGTCGGCTGCTCGCAAGCACCAGCCGTCTATCTACAACTCAGAGGATTCAACCAGGTCTGGAGTCCAAAACATCATTCACCCGTGCATCGGGGACAAGGGGAGGCCGCGATGACACACTCAGGAGCTTTGAACTCCTGTCAATTGGTACTGGAAAAAGGAAATGA 1371 0.4384 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSHPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRLTGKPAVNPGLSGDRLDRPSGGPEIRERLSGAVEAFARRNGSGLNLHRSSDDVPSSKDVLADSERTRSSSRNGSASKRPVVSSSRPSSSGEPSENRSSRLLASTSRLSTTQRIQPGLESKTSFTRASGTRGGRDDTLRSFELLSIGTGKRK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90914g00003 456 SMART serkin_6 9 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90914g00003 456 MobiDBLite consensus disorder prediction 371 434 - -
Stsc90914g00003 456 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90914g00003 456 CDD STKc_CK1_delta_epsilon 8 282 - -
Stsc90914g00003 456 FunFam Casein kinase 1-like protein 1 329 - -
Stsc90914g00003 456 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Stsc90914g00003 456 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90914g00003 456 Gene3D Transferase(Phosphotransferase) domain 1 1 313 - -
Stsc90914g00003 456 PANTHER CASEIN KINASE-RELATED 9 402 - -
Stsc90914g00003 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Stsc90914g00003 456 FunFam Putative Casein kinase I 1 85 - -
Stsc90914g00003 456 MobiDBLite consensus disorder prediction 302 330 - -
Stsc90914g00003 456 MobiDBLite consensus disorder prediction 348 440 - -
Stsc90914g00003 456 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Stsc90914g00003 456 MobiDBLite consensus disorder prediction 356 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90914g00003 Stsc-Chr90914 23870 29617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90914g00003 8 213 MAP Kinase Kinase Kinase AT3G06030 26.389 6.64e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Stsc90914g00003 Pkinase 7.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90914g00003 K08960 - cave:132177205 802.357