Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90914g00002 ATGGAAAATGCAAGGTGCTGGTTTAATAGGTTCAAGTCAAAAGATAAAGTGCCATCATCAAAAAATAAGGATACTACAAGCACCAGAAAAGAAGGGTCAAGACCTCCAACAAATGAAGAAGCACCTTCCAGTGCAACCAAACAGAAGGTTGCAGCTGCAAAACAGTTCATAGAAAACCATTATAAAAAGCAGATGAAGGATCTGCAGGAGAGGAAGGAACGACGTAATATGCTTGAAAAGAAATTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGAATAACTTGCTTAAGTATTTTGAGAAAAAGGAGAGGGAATACATGCGCCTTCAGAGGCATAAGATGGGGGCTGATGATTTTGAGCCCCTGACTATGATAGGGAAGGGTGCGTTTGGAGAGGTGAGGATCTGCCGTGAGAAAGCAACTGGTCATGTATATGCTATGAAGAAACTCAAGAAATCAGAGATGCTTCGCAGAGGGCAGGTTGAACATGTTAAAGCCGAGAGGAACTTACTCGCAGAAGTTGACAGCAATTGCATTGATATACTGACAGAAGATGAGGCAAGGTTCTATGTTGGAGAGACTGTCCTTGCTATAGAGTCTATTCATAAACATAATTATATTCATCGGGATATCAAGCCCGACAATTTGCTGCTGGATAAAAATGGTCACATGAAATTATCTGATTTTGGATTATGTAAACCACTAGACTGCAGTAACCTTCAGGAAACGGATTTCTCTATGGGAAATAACAGAAGTGGTGCCCTTCAGAGTGATGGACGTCCTGTGGCTCCTAAAAGAACTCAACAGGAGCAACTGCAGCATTGGCAGAAAAATAGGCGAACACTTGCCTATTCTACAGTTGGAACACCTGACTATATTGCACCTGAGGTTTTACTGAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCTCTGGGAGCTATAATGTATGAAATGCTAGTGGGATATCCGCCCTTCTATTCCGATGAACCGATGTTGACTTGTAGGAAGATAGTAAATTGGAGAACTCATTTAAAATTTCCAGAAGAAGCTAAACTCTCACCTGAGGCAAAAGATCTTATTAGTCGACTTCTGTGTAATGTGGAACAGAGGCTTGGAACCAAAGGAGCTCATGAAATAAAGGCTCACCCATGGTTCAAAGGTATTGAGTGGGACAAGTTGTACCAAATGAAAGCTGCTTTTATTCCTGAGGTCAATGGTGAATTAGATACTCAAAATTTCGAAAAGTTTGAGGAGGGGGACAGCCAAAGTCAGCCTTCCTCAAAATCTGGACCATGGAGAAAGATGCTGTCATCTAAGGATGTTAACTTTGTTGGCTATACATACAAGAACTTTGAAATTGTGAACGATGATCAACTGCCTGGAATTGCTGAGTTGAAGAAGAAGAACACAAAACCTAAAAGGCCATCTATTAGGACCCTATTTGACGACGAATCAGCTATGGCTGCGAATCAACCTGGCCAAGGGAGCTTCTTAAAACTCTTACCTACTCAACCAGAACTGGGATTTTGGGGGCAGGGGGTTTACTGGGGTGTTTGA 1560 0.4205 MENARCWFNRFKSKDKVPSSKNKDTTSTRKEGSRPPTNEEAPSSATKQKVAAAKQFIENHYKKQMKDLQERKERRNMLEKKLADAEVSEEEQNNLLKYFEKKEREYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLQETDFSMGNNRSGALQSDGRPVAPKRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRTHLKFPEEAKLSPEAKDLISRLLCNVEQRLGTKGAHEIKAHPWFKGIEWDKLYQMKAAFIPEVNGELDTQNFEKFEEGDSQSQPSSKSGPWRKMLSSKDVNFVGYTYKNFEIVNDDQLPGIAELKKKNTKPKRPSIRTLFDDESAMAANQPGQGSFLKLLPTQPELGFWGQGVYWGV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90914g00002 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Stsc90914g00002 519 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 179 - -
Stsc90914g00002 519 SMART pkinase_C_6 387 451 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc90914g00002 519 SMART serkin_6 119 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90914g00002 519 FunFam Non-specific serine/threonine protein kinase 178 238 - -
Stsc90914g00002 519 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Stsc90914g00002 519 CDD STKc_NDR_like 117 450 - -
Stsc90914g00002 519 Gene3D Phosphorylase Kinase; domain 1 55 179 - -
Stsc90914g00002 519 Coils Coil 61 95 - -
Stsc90914g00002 519 CDD MobB_NDR_LATS-like 53 114 - -
Stsc90914g00002 519 Pfam Protein kinase domain 181 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90914g00002 519 Pfam Protein kinase C terminal domain 405 449 IPR017892 GO:0004674|GO:0005524|GO:0006468
Stsc90914g00002 519 MobiDBLite consensus disorder prediction 1 52 - -
Stsc90914g00002 519 FunFam Non-specific serine/threonine protein kinase 285 404 - -
Stsc90914g00002 519 MobiDBLite consensus disorder prediction 7 36 - -
Stsc90914g00002 519 Gene3D Transferase(Phosphotransferase) domain 1 180 406 - -
Stsc90914g00002 519 ProSiteProfiles Protein kinase domain profile. 119 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90914g00002 519 ProSiteProfiles AGC-kinase C-terminal domain profile. 387 459 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc90914g00002 519 SUPERFAMILY Protein kinase-like (PK-like) 93 439 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90914g00002 Stsc-Chr90914 15688 20346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90914g00002 1 507 AGC Kinase Gene Family AT4G14350 76.623 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Stsc90914g00002 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90914g00002 K08790 - gmx:100805439 935.636