Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90905g00010 ATGGTGCCAGAACCCACGGTGGTGGTGGATTCGGTTTCGGGAAAGGTGGCTGGGTCACCAACGGCGGCGGTTTTAGGATGCTCAACCTCCACCACCGTGTTCTCCACCTCCAAGCCCACCATTCTTCTTCTTCTCGAAGGCAGCAGAGGCATCTCCATCGACGATGGTTCCTTCCAGAACGACGGCGGCGAAGAACTTGAAGCTGGTGGTGGTAATGACTTCGAAGCTGATGGTGGTTCGGGAATCTCGGCGGCGGCTTCTGTGGTGGCGGAAACGGCAACAGAAGCTCGGAATTGCAATAATCCAAGTAACGCCCTCTCTTCTCTGTCCACAAAATCTTCATCTCCATGGACTTCACCATCCAAGGATTTTGCCTTTGCTTTCGAATTTGTTCAATTCAAGGATCCACGCTATGTCCCTCTCCTTTCCATCTACTTCACCAAAACACCCAACAAGACCATTGTTTGGTATGCGAGACCCAACCGGGAAATCCCCCTTGGGTCCTCTGTCAATATCACAAACAATGGTCTCGTCATATATGACCCTAAAGGCAGCGAAATTTGGAGCCGTCCAGAAACCAAGGACAAAATGGTAACTTGTGCTTCTATGCAAGATAACGGAAACTTTGTCCTTAAAGACAAAGATGGTGATATAGTTTGGGAGAGTTTTGAAGAACCGAGCGACACACTTCTCCCTGGTCAAAATCTATCAAAGTCTCAGCCATTCCGTTTGCATGCTCGCCAATCCGAAACAAATTTCTCTACCAGCAATAACTTCAATCTTACCTGGCAAGCCGATGGCAATTTGGTACTTTACTATTCTCAGAACCACCAGCAAGACGAACAAGCTCAGAATTATCCATATTGGTCGACCGGAACGGACGGCCGCGGATCGTTTTTGTTCTTCGACGAGTTCGGAAGCATTTATGTTACGGATGATAACAATACTAAGCTGGTTCAAGTAACAGATGGGATCCCGGGTTCAACACAACATTCTTACATGGCGAGAATTGAATCTGATGGAGTTTTCAGGCTCTACAGTTTCCAGAAGACTAAAACGGTTACAAATGAGGATAGCTGTTCTTCTGGATGGAGAGTGTTGGAGCAAGTTCCTGATGATATATGTGTTCTGAACATAGGTCAAAATGAGAATTTTATCTGTGGTCCCAACAGTTATTGTGTTTCCCTAAATGGAAAGCCTCAGTGTATGTGCCCGGATAATTATTCCTACTTTGTACAACCTAATGATCCAAACAACTTAACAAGTTGTAGGCCGAATTTTCCGCCTCCCAGCTGTTTGATGGATGGCTGGGAGACGGATCCGGCCCAGGTGGATTTCCAGGAACGTTGGAATTTGAACTGGCCTTTCTCGGATTACGAGGTCTTGAGCGGGGATTTTGATAAGTACACGTGTCGAGAAAGATGTGGTAGTGATTGCTTCTGTGCTGCGGCTGTGTACTTCCTTGATAAGTACAATGTGGCACATTGTTGGAAGAAGAAGTACCCTTTGAGCAATGGAAGGTATAGTACAACAGTTGAAAATGGAACAATAGTTTTTCTCAAGTTTCGCAAGGCAGGGTATGGTAACAAACATCGATCTTATTTGACACTTGTTTTGTCATTTCTTCTTGGGAGCTCGGTTTTCCTTAACATTCTTTTGCTATTGGGACTTGTTGGAGTTTTCATGTTCTTGCGCAAGAGAAAGATGTTAGGTCAACAACTGAATGAAAGCTTGGCACCTGAGACAGTTAGAAGCTACACATACAAGGAGCTTGAGAAGGCAACAAGAGGGTTCAAACAGAAATTAGGTCAAGGTGCTTTTGGAAGTGTGTATAAAGGGGTGTTAGGGTCTCCTACAAAGAGATTTGTAGCTATTAAGAAGTTAGATAAGGTGGTTGAAGAAGGTGAAAATGAATTCAAAACAGAGGTGAGTGTGATAGGCCAAACCCACCACCGGAATTTGGTTCGCTTGCTCGGTTACTGCGACGAAGGGGAGCATCGTCTTCTTGTTTATGAGTACATGAGCAATGGTTCATTGGCGAACTTTCTTTTTGGGATTTCCAGGCCTCATTGGAATCAAAGGGTGCAAATTGGATTGGGAATAGCTAAAGGTCTTACATATTTGCATGAAGAGTGCAACACTCAATTCATTCATTGCGATATAAAGCCTCAAAACATTCTCTTGGATGACTTATTCGCACCTAGGATATCCGATTTCGGGCTAGCAAAGCTGTTGTTGAGAGAGCAAACTCGAGCCACTAGGACGCATGCGAGAGGAACCGTTGGATACTTTGCACCCGAATGGTTCACGAAAGCTTCCATCACAAGCAAAGTCGACGTTTACAGCTTTGGAGTGGTGCTGCTAGAGCTCATATGCTGCAAATCGAGTATTGTGTTTTCAATGTCGAATGAAGAAGAACAAGCGCTGATTGATTGGGCATATGATTGCTATAGACATGAGAAATTGGTTAAGTTTGTTGAGAATGATGAGGAAGCAAAGAATGACATTAGGAGGGTAGAAAAGCATGTTATGGTAGCAATTTGGTGTGTTCAAGATGATCCTTCACTAAGGCCTTCCATGAAGAAGGTTACTCAAATGCTTGAGGACGTTATTGCTGTGCCTTTGCCACCTCGACCTTCCATGTTTAGTTCACCATCATCTGCTAGTTCTTTAAGTAATGTTTCTTTTTGA 2691 0.4441 MVPEPTVVVDSVSGKVAGSPTAAVLGCSTSTTVFSTSKPTILLLLEGSRGISIDDGSFQNDGGEELEAGGGNDFEADGGSGISAAASVVAETATEARNCNNPSNALSSLSTKSSSPWTSPSKDFAFAFEFVQFKDPRYVPLLSIYFTKTPNKTIVWYARPNREIPLGSSVNITNNGLVIYDPKGSEIWSRPETKDKMVTCASMQDNGNFVLKDKDGDIVWESFEEPSDTLLPGQNLSKSQPFRLHARQSETNFSTSNNFNLTWQADGNLVLYYSQNHQQDEQAQNYPYWSTGTDGRGSFLFFDEFGSIYVTDDNNTKLVQVTDGIPGSTQHSYMARIESDGVFRLYSFQKTKTVTNEDSCSSGWRVLEQVPDDICVLNIGQNENFICGPNSYCVSLNGKPQCMCPDNYSYFVQPNDPNNLTSCRPNFPPPSCLMDGWETDPAQVDFQERWNLNWPFSDYEVLSGDFDKYTCRERCGSDCFCAAAVYFLDKYNVAHCWKKKYPLSNGRYSTTVENGTIVFLKFRKAGYGNKHRSYLTLVLSFLLGSSVFLNILLLLGLVGVFMFLRKRKMLGQQLNESLAPETVRSYTYKELEKATRGFKQKLGQGAFGSVYKGVLGSPTKRFVAIKKLDKVVEEGENEFKTEVSVIGQTHHRNLVRLLGYCDEGEHRLLVYEYMSNGSLANFLFGISRPHWNQRVQIGLGIAKGLTYLHEECNTQFIHCDIKPQNILLDDLFAPRISDFGLAKLLLREQTRATRTHARGTVGYFAPEWFTKASITSKVDVYSFGVVLLELICCKSSIVFSMSNEEEQALIDWAYDCYRHEKLVKFVENDEEAKNDIRRVEKHVMVAIWCVQDDPSLRPSMKKVTQMLEDVIAVPLPPRPSMFSSPSSASSLSNVSF 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90905g00010 896 Gene3D - 104 224 IPR036426 -
Stsc90905g00010 896 Pfam D-mannose binding lectin 153 239 IPR001480 -
Stsc90905g00010 896 SUPERFAMILY alpha-D-mannose-specific plant lectins 251 347 IPR036426 -
Stsc90905g00010 896 SMART serkin_6 596 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90905g00010 896 ProSiteProfiles Bulb-type lectin domain profile. 103 224 IPR001480 -
Stsc90905g00010 896 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 674 874 - -
Stsc90905g00010 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
Stsc90905g00010 896 CDD B_lectin 121 226 IPR001480 -
Stsc90905g00010 896 Gene3D Phosphorylase Kinase; domain 1 561 673 - -
Stsc90905g00010 896 ProSitePatterns Protein kinases ATP-binding region signature. 602 627 IPR017441 GO:0005524
Stsc90905g00010 896 ProSiteProfiles Protein kinase domain profile. 596 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90905g00010 896 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 111 878 - -
Stsc90905g00010 896 SUPERFAMILY Protein kinase-like (PK-like) 579 867 IPR011009 -
Stsc90905g00010 896 FunFam S-receptor-like serine/threonine-protein kinase 565 673 - -
Stsc90905g00010 896 CDD STKc_IRAK 602 868 - -
Stsc90905g00010 896 PIRSF SRK 84 895 IPR024171 GO:0004674
Stsc90905g00010 896 SMART blect_4 108 226 IPR001480 -
Stsc90905g00010 896 SUPERFAMILY alpha-D-mannose-specific plant lectins 150 293 IPR036426 -
Stsc90905g00010 896 Gene3D Transferase(Phosphotransferase) domain 1 674 873 - -
Stsc90905g00010 896 Pfam Protein kinase domain 599 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90905g00010 896 MobiDBLite consensus disorder prediction 55 74 - -
Stsc90905g00010 896 Gene3D - 226 360 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90905g00010 Stsc-Chr90905 53008 58168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90905g00010 559 868 Receptor kinase-like Gene Family AT1G60800 41.486 1.27e-68 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc90905g00010 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90905g00010 - - ahf:112707732 1376.3