Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90903g00014 ATGGTTTCCGACTCTGCCTCCAAACCTCAGAACCGGCATGGAGAGCCACTGGAAGGTACTAGTGGAACCTTGGCGAGCAAGATAGATCAGATGAGGAAGCAAATCCAGGAGGAGAGAATTATATCTGTCAAAGAAAAACTACAGAAGAATGGTGAAAATCTACAACGTCAGATTTCAGCTATCTTGTCAGTTATCTCAAGTTGGGACTCATCTCAGACCAAGGAAAATAGGTCCAGTGAAATGCTTTCTTCAAGAATTAATCAACCTCAGTCTAAATACCTTGCTTTATCTCAACTTTTAGGAGAGAACAATCCTGTTGGAATACCAGCACTAACTATCAAGCTTCAACCCGTTGAAAAAATACCAACATATACAACTTGGATACATTTGGCCAGAAATGTGAAAATGGGTGAAGATCAGTCAATTATTGGAAGAAGACGCATCTACTATGAGAAACACGGAGGTGAAGCACTGATATGCAGTGACAGTGACGAAGAAGAAGTAACAGAAAATGAGGGAGAAAATGAGGGAGTTAAGCATGAATTTTCTGAGGGTGAAGACCGACTTTTATGGATGGCATTTGAGGAACTTGGGCTAACTGATGAGGTATTGAATATTGTTAGCCAGTCTGTTCGGGGTACCAGTTTGGAAATTCAGGATAGGTACAAGGATCTCAAGGCAAAAAATATGGGGAGGCAGAACCAACATTCTGAAGATTCTGGAGCATACAAATCTCACATTGGCATATGTTTGGAGAAAAGCCTGGGTGCTGCTTTAGATTCTTTTGATAACCTTTTCTGTCGCCGTTGCATACAGCTGTTTGACTGTCCCCTGCACGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGCCAGTTTGGTCTGAACCTGAAGGTGACCGGAAACCATGCAGTGACCAGTGTTATCTTCTGTTAAAGGATGTCAAGATGTTGTCGGAATGTTCAACTCCTGGGTCCTTGCAGGGTAAGATAACTGCAACAACAGAAGCAGACGGGATTGTGGCACCTTCCAGTGAAGAGGGGTCAAGTAATCAAAGTACCAAAGCTATCTCACAGGAGGGAAGACGTTTCACAAAAGATCTCAAATCTGATGTTCCTGTCCCAGAAATTATGGGGAAACGTAGGGTCAAAGTTAAGTCAGACTCAGCATTACGAGATTCCATATTGCCTCATGATTATTCTCAGACTCAGAACTCTAGTAAAAAGATGAAGACAGTCTCAGATGATACAGTTACTGGAAGCAATGACTATAACGGTGACCTAAATTTGGATGCATGCAATGAAGAAAAACAGTGTGTTACTCATGCTTCATCAGAAGTTTCTGTTGAACATACTTCCGGTAGCAGCGGCAATGTAAAACCTGACAAGGATGTTGTGGATAGGCAAAAAGATACCACAAATGAGACTGAATTTAAGAATTTGTACAGTTCTATGGAAGGGCAGTTTGATGAGAAACTAAGTTTCTCAGATTGGAAACCTCTGGAGAAAGAATTATATTTGAAGGGAGTAGAAATGTTTGGAAGAAACAGCTGCCTTATAGCACGGAACTTGCTTCCTGGCTTGAAGACTTGCATGGAAGTAGCTAGTTACATGTCAATTCCCCACACATTCAGTCATGGAACAGGTTCAATCACAGACGAAAATGGAAAAATCACTGCAAATCGCATGGACCAAAAGATGTCATCAAGGTCACGCATGGTGCGGAAAAGGGGCAAAACAAGGAAATCTAAACATTCGTCTAAGTCTGCTGGCATCCCATATGCTTTGAAAAGAATTGCTTCTGGGAAAAACCAATCTATCAAACAGTATACACCATGTGAATGTCAGACAATGTGTGGAAAGGAATGTCCTTGTCACACCAATGGAACTTGCTGTGAAAAATATTGCGGGTGTTCAGATATATGCAAAAATAGGTATAGAGGATGCCATTGTGCTAAGAGTCAATGCAAAAGTCGACAATGCCCATGTTTTGCAGCTGGAAGAGAATGTGACCCAGATGTCTGTCGAAACTGCTGGGTTAGTTGTGGCGGTGGTTCACTAGGGGAGCCACCTCGACGTGGAGATGGTCATTGTGGAAATATGAGGATGCTTTTAAGGCAACGACAGAGGATTCTTTTGGCAAAGTCATCTCTTGTAGGATGGGGAGCCTTCATAAAGAACTCAGTTAACAAAAATGATTACCTAGGAGAATACACGGGCGAGCTGATTTCTCATAAAGAAGCAGATAAGCGTGGGAAAATATATGATCGCGAGAACTCATCTTTCCTTTTTAACTTAAATGATCAGTTGGTACTGGATGCTTGTCGCAAGGGTGATAAGTTGAAATTCGCAAACCACTGGCAAAGCCCCAACTGCATTGCAAAGGTAATGCTGGTGGCCGGTGATCATAGAGTTGGCATATATGCCAACAAAAACATTAACGCTGGTGAGGAGCTCTTCTATGATTATTGCTATGAACCAGAACACAGGCCACCATGGGCGGTTCCTAAAGGTGAGGCTTCTAAGAAAGATGAATCTGCTGCTAATCAAAGCAGGTCAAAGAAACACCAATCTCATTGA 2583 0.4212 MVSDSASKPQNRHGEPLEGTSGTLASKIDQMRKQIQEERIISVKEKLQKNGENLQRQISAILSVISSWDSSQTKENRSSEMLSSRINQPQSKYLALSQLLGENNPVGIPALTIKLQPVEKIPTYTTWIHLARNVKMGEDQSIIGRRRIYYEKHGGEALICSDSDEEEVTENEGENEGVKHEFSEGEDRLLWMAFEELGLTDEVLNIVSQSVRGTSLEIQDRYKDLKAKNMGRQNQHSEDSGAYKSHIGICLEKSLGAALDSFDNLFCRRCIQLFDCPLHGCSQPLIYPSEKQPVWSEPEGDRKPCSDQCYLLLKDVKMLSECSTPGSLQGKITATTEADGIVAPSSEEGSSNQSTKAISQEGRRFTKDLKSDVPVPEIMGKRRVKVKSDSALRDSILPHDYSQTQNSSKKMKTVSDDTVTGSNDYNGDLNLDACNEEKQCVTHASSEVSVEHTSGSSGNVKPDKDVVDRQKDTTNETEFKNLYSSMEGQFDEKLSFSDWKPLEKELYLKGVEMFGRNSCLIARNLLPGLKTCMEVASYMSIPHTFSHGTGSITDENGKITANRMDQKMSSRSRMVRKRGKTRKSKHSSKSAGIPYALKRIASGKNQSIKQYTPCECQTMCGKECPCHTNGTCCEKYCGCSDICKNRYRGCHCAKSQCKSRQCPCFAAGRECDPDVCRNCWVSCGGGSLGEPPRRGDGHCGNMRMLLRQRQRILLAKSSLVGWGAFIKNSVNKNDYLGEYTGELISHKEADKRGKIYDRENSSFLFNLNDQLVLDACRKGDKLKFANHWQSPNCIAKVMLVAGDHRVGIYANKNINAGEELFYDYCYEPEHRPPWAVPKGEASKKDESAANQSRSKKHQSH 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90903g00014 860 ProSiteProfiles SET domain profile. 710 825 IPR001214 GO:0005515
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 1 29 - -
Stsc90903g00014 860 FunFam Putative histone-lysine N-methyltransferase EZH2 611 827 - -
Stsc90903g00014 860 Gene3D SET domain 611 826 IPR046341 -
Stsc90903g00014 860 Pfam SET domain 721 824 IPR001214 GO:0005515
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 342 366 - -
Stsc90903g00014 860 CDD SET_EZH 710 826 - -
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 446 460 - -
Stsc90903g00014 860 SUPERFAMILY SET domain 606 829 IPR046341 -
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 835 860 - -
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 345 360 - -
Stsc90903g00014 860 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 860 IPR025778 GO:0031519
Stsc90903g00014 860 SMART CXC_2 645 682 IPR033467 -
Stsc90903g00014 860 SMART set_7 710 831 IPR001214 GO:0005515
Stsc90903g00014 860 ProSiteProfiles CXC domain profile. 597 696 IPR026489 -
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 564 589 - -
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 397 416 - -
Stsc90903g00014 860 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 22 858 IPR045318 GO:0006338|GO:0042054
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 446 473 - -
Stsc90903g00014 860 Pfam CXC domain 649 680 IPR041355 -
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 835 853 - -
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 573 587 - -
Stsc90903g00014 860 MobiDBLite consensus disorder prediction 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90903g00014 Stsc-Chr90903 47285 54909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90903g00014 709 828 C2H2 Transcription Factor Family AT2G23740 27.737 1.82e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc90903g00014 SET 3.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90903g00014 - - ahf:112695738 1557.35