Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90903g00010 ATGAATAATATTATGGACGCCAATGTATCCACTAAACTTGAATCAGAAGAAACTTTTGAGGACCTCAAATCATCAGAAACTCAGGCATCTAAGAAAAGGAAAACGGTTGAGAAAACTGTTGTGAGGGTGAGGATAGGAGAGGGAAACAATATCAGCAGACTGAAGAATGAAGGGCTACCTTCAGATTTTTGGTCTTGGAGGAAATATGGACAAAAGCCAATCAAAGGATCTCCATATCCAAGGGGTTATTACAGATGCAGCACATCAAAGGGGTGTTCAGCAAAGAAGCAAGTAGAGAGATGCAGAACAGATGCCTCAATGCTCATAATCACATATTCCTCTACACATAATCACCCTTCTCCTGATGAAATAATCTCCACTGCAAATTTATCACAAAAACCAAAAGAACAAGAAACCACGGAAGAAGACCTCTCAAAGGTGGAAGAACAAGAACATGAACATGTTGAAGAAGAAAACAAGGATCATGACAAGGCTAGTAGTATTACAGCTGATGAGAAGAGTGAGAAGAGTTTCCATTACTTGCAATCTCCAATAGGCAGCAGCCATGAAGAGATTACTGTTACAGATCAAGAAGATCCATTCAAGCTAATAAGCACTGATGAGAAAAGCAATGAAAGAATAGATGTTTTGTTAGAAGAGGAAGAGCCAGTATGCTATGCACAGATCAAGAACTTGACAACAACAGCAAAATCAGAAGAACTTGATTTCTTCGATGAGCTTGAGGAGTTGCCCATGTCTTCATCTTTCTTGCACTTCACGAGGAGCATTTTATCCGATGAAAGGATTCCCGTTTCTCCTTCTTGA 825 0.3964 MNNIMDANVSTKLESEETFEDLKSSETQASKKRKTVEKTVVRVRIGEGNNISRLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIITYSSTHNHPSPDEIISTANLSQKPKEQETTEEDLSKVEEQEHEHVEEENKDHDKASSITADEKSEKSFHYLQSPIGSSHEEITVTDQEDPFKLISTDEKSNERIDVLLEEEEPVCYAQIKNLTTTAKSEELDFFDELEELPMSSSFLHFTRSILSDERIPVSPS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90903g00010 274 MobiDBLite consensus disorder prediction 135 178 - -
Stsc90903g00010 274 MobiDBLite consensus disorder prediction 15 35 - -
Stsc90903g00010 274 MobiDBLite consensus disorder prediction 113 178 - -
Stsc90903g00010 274 FunFam WRKY transcription factor 65 47 121 - -
Stsc90903g00010 274 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 255 IPR044810 GO:0003700
Stsc90903g00010 274 Pfam WRKY DNA -binding domain 62 119 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90903g00010 274 SUPERFAMILY WRKY DNA-binding domain 56 121 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc90903g00010 274 SMART WRKY_cls 60 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90903g00010 274 ProSiteProfiles WRKY domain profile. 55 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90903g00010 274 MobiDBLite consensus disorder prediction 113 134 - -
Stsc90903g00010 274 Gene3D WRKY domain 47 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90903g00010 Stsc-Chr90903 30524 32339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90903g00010 31 123 WRKY Transcription Factor Family AT2G34830 65.591 1.34e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc90903g00010 WRKY 2.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90903g00010 - - adu:107492378 414.846