Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90903g00004 ATGGCTTATAATAAGAGTGGCCTTCTCCTCATTGTGACACTCTCCTCTATCCTCCTAGGCCATGCATATAGACACCCAGCAGGGAAATCAATCTGGTTCACCGATCCTGTCCCCGCCCCGGCCGCGGGCCCCGTCCCCAGCAACCCAGTCACCGACGTCCTCGGCGGCTTGAACTTGGATAACATCAAGTCTGCCGTTGAAGATGCAAAATCCAAGGTCCAGGTGGATGACTTCTGCGCTGGCACCGAGCGCCCTGAGCTGTGTGCCAAAACCATTGCACCATTATTCGTTTCAGGACAATTCGATCCATTGAAGGCCCTTGAAGCTGAATTGGGCGCCACCCTTAACGAGACCTTGAAGGTTGTGGACAAGATCGCTGAATCATTGCAGAACCCCGACACCGAAGCTGATGCTATGCCGGCTCTCGACGTTTGCAGGGAGTGCTACGACTACGCTGTTGATGCCATCAAGGAATCCATTGAGCTCTTGAAGCAGATGAACATCGTTGATGCTTACCACAAGGTGAGCAGCATTAACGGTAACACTGCTACCTGCGATGATACTTTCGATGAATCAGAGGGAGCCACCAACCCTCTTCCTAGAGACGTTATTGATACTATCTTTAAACTCACTGGAAACTGCTTGGCAATCTTGGATGGCTGGGTCAACAACCAAAACAAACTCTTTGTTTAA 693 0.5079 MAYNKSGLLLIVTLSSILLGHAYRHPAGKSIWFTDPVPAPAAGPVPSNPVTDVLGGLNLDNIKSAVEDAKSKVQVDDFCAGTERPELCAKTIAPLFVSGQFDPLKALEAELGATLNETLKVVDKIAESLQNPDTEADAMPALDVCRECYDYAVDAIKESIELLKQMNIVDAYHKVSSINGNTATCDDTFDESEGATNPLPRDVIDTIFKLTGNCLAILDGWVNNQNKLFV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90903g00004 230 PANTHER PECTINESTERASE INHIBITOR-LIKE 63 218 - -
Stsc90903g00004 230 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 219 IPR035513 -
Stsc90903g00004 230 CDD PMEI-like_2 74 217 - -
Stsc90903g00004 230 SMART PMEI_2 70 217 IPR006501 GO:0004857
Stsc90903g00004 230 Pfam Plant invertase/pectin methylesterase inhibitor 75 217 IPR006501 GO:0004857
Stsc90903g00004 230 Gene3D Invertase/pectin methylesterase inhibitor family protein 72 220 IPR035513 -
Stsc90903g00004 230 NCBIfam pectinesterase inhibitor domain 68 219 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90903g00004 Stsc-Chr90903 13963 15103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90903g00004 68 223 Carbohydrate Esterase AT3G05610 23.837 5.46e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90903g00004 - - ahf:112756681 215.698