Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90903g00003 ATGTCTATCGGTTTATTGAAGAATGTTCAAGGCCTGTTGCTGAAATGGCTTCTCTTGTTATTCTGTCTGGTTTTTGTCATTGAGTCTGGTGCAAGTAATATAGGACGCCAGCCTTCACTGTTAGCTTCAGCCAGACCACTACCAGTAGATGTCCACGGGTCGAAGCATTTTTCCTTTCATGGTACACCAGTTGTAGCAGTTTCACCAGCCAATCCTCCTTCGTATAGTCCTTTCATGAGTGCCAGTCATCCCCCTGGAAGTTCACATTTCTCGGTACCATTCAAGAAGAAGAGTGAATTACAACCTCCAATTTCCGGCTTTAAAGATATTGCTCCTATACATTCTGCTGGAGCTGCAACCCCTTCTGCTTTGGCTCAGCCACCACTGGCCCCTTATGTTTCCAATTGTTGTAAACAAGACATGGTGTTGAAACGAGGAAGTAAGAGTTGCCAGTGTGTGTATCCAATAAAGCTAGACCTTCTGCTTTTGAATGTCTCTCAAAGTCGTACATGGAATGCTTTTCTTGATGAGTTAGCTACTCATCTTGGGCTACGCAACACCCAGATTGAGCTGATAAATTTCTATGTACTCGGTTTATCAATGTTAAACATGTCAATGGATATTACACCATATAAAGGGATCGGTTTCTCTGCCAGCGAAGCAGCTAAGATAAACTCATCACTTTCAATGCATAAGATTCAACTCGACCCTAAATTAGTGGGTGACTACAAAGTCATCAATATAACTTGGTTTCAACCTCCACCACCTTCTCCAGCTCCTGCTTTTGCTGCATCGCCTGCAAATACTCCCCTGCATCCTTCACCTACAGCTGCATCATCAAGTTCATCAAATAGTGGAAGGCATTCAAATTTGTTTCTCATTCTTGGAATTGCTATAGGCTTACTCTTCATTGCGATCATATCTATACTTATACTTTGTTTATGCACATTGTTGCCGAAGGCAAAAGCACCTCCCGTTGAAACTGAAAAGCCGAGGACAGAAAGTACTGTTTCAGCTGTGGGTTCACTTCCCCATCCATCTAGCACAAGGTTTATTGCTTATGAAGAACTTAAAGAGGCAACAAACAATTTTGAACCAGCAAGTGTGCTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGCGTCTTAAATGATGGTACTGCTGTAGCAATAAAGAGACTCACTAGTGGAGGGCAACAGGGTGACAAAGAGTTTCTTGTTGAGGTTGAGATGCTCAGCCGGTTGCATCATCGTAACCTTGTAAAGCTAGTGGGATATTATAGCAATCGTGATTCATCACAAAATCTACTTTGTTATGAGCTTGTCCCTAATGGAAGTTTGGAGGCCTGGCTTCATGGGCCCTTGGGAATAAATTGTCCCTTGGATTGGGACACCAGAATGAAAATTGCCCTCGATGCTGCTAGAGGACTTTGTTACCTCCATGAAGACTCACAACCCTGTGTGATACACAGAGATTTCAAGGCATCGAACATATTGCTTGAGAACAACTTTCATGCCAAAGTAGCAGATTTTGGTCTTGCTAAGCAAGCACCTGAAGGCAGAGCTAATTACTTGTCCACTCGTGTCATGGGTACTTTTGGGTATGTAGCTCCTGAGTATGCCATGACCGGGCACCTTCTTGTTAAAAGTGATGTCTATAGCTACGGGGTTGTCTTGCTGGAGCTGCTTACTGGAAGGAAACCTGTGGACATGTCACAGCCAACTGGACAAGAGAACCTTGTAACCTGGGCTAGGCCAATCCTTCGAGACAAGGACAGGTTGGAAGAGATTGCGGATCCAAAACTTGGGGGGAAATATCCAAAGGAAGATTTTGTACGTGTTTGTACTATTGCTGCTGCTTGTGTCGCTCCTGAAGCAAACCAACGACCAACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAGCGCATCACAGAGTACCAGGATTCCANNNNNNNNNNAGGGCAAACCTGA 1977 0.438 MSIGLLKNVQGLLLKWLLLLFCLVFVIESGASNIGRQPSLLASARPLPVDVHGSKHFSFHGTPVVAVSPANPPSYSPFMSASHPPGSSHFSVPFKKKSELQPPISGFKDIAPIHSAGAATPSALAQPPLAPYVSNCCKQDMVLKRGSKSCQCVYPIKLDLLLLNVSQSRTWNAFLDELATHLGLRNTQIELINFYVLGLSMLNMSMDITPYKGIGFSASEAAKINSSLSMHKIQLDPKLVGDYKVINITWFQPPPPSPAPAFAASPANTPLHPSPTAASSSSSNSGRHSNLFLILGIAIGLLFIAIISILILCLCTLLPKAKAPPVETEKPRTESTVSAVGSLPHPSSTRFIAYEELKEATNNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLCYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEEIADPKLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYQDSXXXXGQT 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90903g00003 658 Pfam Protein tyrosine and serine/threonine kinase 368 639 IPR001245 GO:0004672|GO:0006468
Stsc90903g00003 658 FunFam Receptor-like serine/threonine-protein kinase ALE2 442 654 - -
Stsc90903g00003 658 MobiDBLite consensus disorder prediction 259 282 - -
Stsc90903g00003 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Stsc90903g00003 658 Gene3D Transferase(Phosphotransferase) domain 1 442 655 - -
Stsc90903g00003 658 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Stsc90903g00003 658 ProSiteProfiles Protein kinase domain profile. 364 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90903g00003 658 SUPERFAMILY Protein kinase-like (PK-like) 339 641 IPR011009 -
Stsc90903g00003 658 FunFam Receptor-like serine/threonine-protein kinase ALE2 344 441 - -
Stsc90903g00003 658 Gene3D Phosphorylase Kinase; domain 1 327 441 - -
Stsc90903g00003 658 PANTHER OS01G0750732 PROTEIN 134 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90903g00003 Stsc-Chr90903 8294 13226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90903g00003 12 650 Receptor kinase-like Gene Family AT4G02010 67.334 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Stsc90903g00003 PK_Tyr_Ser-Thr 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90903g00003 - - adu:107492376 1136.71