Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90900g00002 ATGGGTCGCAGAAAGAACAACAACAACAACAACGACATGAACAACAACAACCACCTTCGCTTCCAAGACGCCGACGAGGTTATCCAAGACGCCGCCGAGAGCTCCAACCTCGATGACCAATCTATGTGTGAACCTGAACAATCAGAGCCATCCTTTCTTGATTCCGATGATAAGACCAGCGCCGATTACTACTTCGATTCCTACTCTCACTTTGGAATTCACGAAGAAATGTTGAAGGACACTGTAAGAACAAAAACATATCAGAATGTTATTTATCAGAATAGGTTCTTATTCAAGGATAAAGTAGTTCTTGATGTTGGTGCTGGGACTGGGATTTTGTCTCTATTTTGTGCCAAAGCTGGGGCAGCACATGTCTATGCTGTTGAGTGCTCCGATATGGCTGATATGGCAAAGCAGATAGTTGAAACTAATGGGTACTCTAATGTTGTAACAGTTTTGAAGGGTAAGATTGAAGAAATCGAACTTCCAGTTGAAAAAGTTGATATAATCATTTCAGAATGGATGGGATATTTCCTATTGTTTGAGAATATGTTAAACTCTGTCCTTTACGCACGTGACAAATGGCTTGTCGAAGGTGGAGTTGTGCTACCAGATAAAGCGTCCCTCCATCTTACTGCCATTGAAGATGCAGACTACAAAGAAGATAAAATAGAGTTTTGGAACAATGTATATGGATTTGATATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCACTTGTTGATACAGTTGACCAGAATCAGATTGCTACTAACTGCCAGTTACTCAAGACTATGGATATCTCAAAGATGTCTCCTGGAGATGCTTCCTTCACTGCACCGTTTAAACTTATTGCTGAACGCGATGATTACATCCATGCCCTTGTTGCATATTTTGATGTAACATTTACCAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCGAGGTCACGTGCCACTCATTGGAAACAAACAGTGCTTTATCTGGAAGACATATTGACCATTTGTCAGGGTGAGGCGATCGTTGGGAGCATGACTGTTGCTCAAAACAAGAAAAATCCTCGCGATGTCGACATAATGGTCAAGTACTCGTTGAATGGTCGCAGATGCAATGTTTCAAGGGTTCAGTATTACAAGATGCGTTGA 1149 0.416 MGRRKNNNNNNDMNNNNHLRFQDADEVIQDAAESSNLDDQSMCEPEQSEPSFLDSDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNRFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSDMADMAKQIVETNGYSNVVTVLKGKIEEIELPVEKVDIIISEWMGYFLLFENMLNSVLYARDKWLVEGGVVLPDKASLHLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMSPGDASFTAPFKLIAERDDYIHALVAYFDVTFTKCHKLMGFSTGPRSRATHWKQTVLYLEDILTICQGEAIVGSMTVAQNKKNPRDVDIMVKYSLNGRRCNVSRVQYYKMR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90900g00002 382 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 21 369 IPR025799 GO:0016274|GO:0018216
Stsc90900g00002 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 67 381 IPR029063 -
Stsc90900g00002 382 CDD AdoMet_MTases 103 203 - -
Stsc90900g00002 382 MobiDBLite consensus disorder prediction 33 56 - -
Stsc90900g00002 382 Gene3D Vaccinia Virus protein VP39 52 204 IPR029063 -
Stsc90900g00002 382 FunFam Blast:Protein arginine N-methyltransferase 1 206 382 - -
Stsc90900g00002 382 MobiDBLite consensus disorder prediction 33 48 - -
Stsc90900g00002 382 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 61 362 IPR025799 GO:0016274|GO:0018216
Stsc90900g00002 382 FunFam probable protein arginine N-methyltransferase 1 52 204 - -
Stsc90900g00002 382 Pfam Ribosomal protein L11 methyltransferase (PrmA) 97 173 - -
Stsc90900g00002 382 Gene3D - 206 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90900g00002 Stsc-Chr90900 28748 31485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90900g00002 13 344 C2H2 Transcription Factor Family AT3G12270 36.723 2.82e-68 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90900g00002 K11434 - gmx:100781777 670.233