Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90895g00002 ATGGCTCCGAAGGCACCGAGTACGGGTCTTTTCGTTGGAATGAACAAGGGTCATATCGTCACCAAGAAGGAGCTGCCTCCCCGTCCCAGAGATCGCAAAGGGAAAACAAGCAAGAGGGTGCACTTTGTGCGGAATCTTATTCGCGAGGTTGCTGGTTTTGCGCCATATGAGAAGCGTATCACTGAGTTGCTCAAGGTTGGAAAGGATAAGAGGGCATTAAAGGTTGCCAAGAGGAAGCTCGGCACCCACAAACGTGCCAAGAAGAAGAGAGAGGAGATGTCCAATGTCCTCAGAAAGATGAGGGCTGGTGGAGGAGGTGAAAAGAAGAAGTAA 333 0.5045 MAPKAPSTGLFVGMNKGHIVTKKELPPRPRDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGGEKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90895g00002 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 106 IPR000509 GO:0003735|GO:0005840|GO:0006412
Stsc90895g00002 110 MobiDBLite consensus disorder prediction 79 110 - -
Stsc90895g00002 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Stsc90895g00002 110 Gene3D 60S ribosomal protein L36 2 105 IPR038097 -
Stsc90895g00002 110 MobiDBLite consensus disorder prediction 1 38 - -
Stsc90895g00002 110 MobiDBLite consensus disorder prediction 87 110 - -
Stsc90895g00002 110 FunFam 60S ribosomal protein L36 1 106 - -
Stsc90895g00002 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90895g00002 Stsc-Chr90895 24786 26143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90895g00002 8 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 84.762 8.13e-58 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90895g00002 K02920 - gmx:100785591 211.846