Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90891g00003 ATGGCTCGAGGTGGTGATAAAGTGCTAACTGCACTTGACACAGCAAAGACGCAATGGTACCACTTCACCGCCATCGTCATCTCCGGCATGGGATTCTTCTCCGACGCTTACGATCTCTTCAACGTACCCAACGTCACCAAGCTGCTCGGACGCATATACTACACACACGAAGGCTCCCCAAAGCCCGGCACCCTCCCTCCCAACGTCTCATCCGCCGTCAACGGCGTCGCCCTCTGCGGCACTCTAGCCGGCCAGCTCTTCTTCGGTTGGTTGGGTGACAAACTCGGTAGAAAGAAAGTCTATGGAATCACTCTTGCTCTCATGGTTATCTCCTCTCTTGCTTCTGGTTTGTCCTTCGGAAAAACCGCCAAGGGCGTGATTTCCACGCTCTGTTTCTTCAGGTTTTGGCTTGGCTTTGGAATCGGCGGTGATTACCCTCTCTCCGCCACAATTATGTCCGAATACGCCAACAAGAAGACCCGCGGCGCTTTCATAGCGGCGGTTTTCGCTATGCAGGGGTTTGGTATTTTGGTCGCCGGAATCGTATCACTCATTGTCGCCGCCGCGTTTGACCACGCTTATAAGGCACCGGCGTACAACGTGGATCCAAAGGCATCACTTGTTCCTGAAGCTGATTACGTGTGGCGGATTATCTTGATGTTCGGCGCTGTGCCGGCGGCGTTGACATACTATTGGCGGATGAAGATGCCGGAAACCGCCAGGTACACAGCGCTGGTGGCCCGGAACGCGAAGCAGGCAGCGCAAGACATGTCAAAGGTGCTGCAAGTTGAGATCGAAGCAGAGCAAGCAAAGGAGGATGCCATAGTAGAGGTGAGAGAAGACAATAACAACAGCTTTGGATTGTTTTCAAAAGAATTCGCCCGCCGCCACGGTCTGCATTTGCTTGGAACAACTACCACTTGGTTTCTACTTGACGTTGCTTATTACAGTTCAAATCTTTTCCAGAAAGATATTTACAGTAGCATTGGGTGGCTTCCTCCGGCGGCCGAGATGAGCGCGATTCAGGAGGTTTACAAGGTTGCTAGAGCTCAGACACTCATAGCTTTGTGTGGCACTGTCCCTGGGTATTGGTTCACGGTGGCGTTCATAGACTACTTGGGTCGATTCTTCATCCAAATTATGGGTTTCTTCTTCATGACTGTTTTCATGTTTGCTCTTGCCATTCNNNNNNNNNNAATCACTGGACTAAGAAAGACCACAGGATTGGTTTCTTGGTTATGTATTCTCTTACTTTCTTCTTTGCAAATTTTGGTCCCAACTCCACCACTTTTATTGTCCCGGCAGAGATATTTCCCGCGAGGCTGA 1326 0.5038 MARGGDKVLTALDTAKTQWYHFTAIVISGMGFFSDAYDLFNVPNVTKLLGRIYYTHEGSPKPGTLPPNVSSAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLALMVISSLASGLSFGKTAKGVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILVAGIVSLIVAAAFDHAYKAPAYNVDPKASLVPEADYVWRIILMFGAVPAALTYYWRMKMPETARYTALVARNAKQAAQDMSKVLQVEIEAEQAKEDAIVEVREDNNNSFGLFSKEFARRHGLHLLGTTTTWFLLDVAYYSSNLFQKDIYSSIGWLPPAAEMSAIQEVYKVARAQTLIALCGTVPGYWFTVAFIDYLGRFFIQIMGFFFMTVFMFALAIXXXXITGLRKTTGLVSWLCILLLSSLQILVPTPPLLLSRQRYFPRG 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90891g00003 441 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 441 IPR020846 GO:0022857
Stsc90891g00003 441 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 405 - -
Stsc90891g00003 441 Pfam Sugar (and other) transporter 67 415 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc90891g00003 441 FunFam Inorganic phosphate transporter 1-6 20 419 - -
Stsc90891g00003 441 SUPERFAMILY MFS general substrate transporter 12 431 IPR036259 -
Stsc90891g00003 441 CDD MFS_PhT 25 395 - -
Stsc90891g00003 441 Gene3D MFS general substrate transporter like domains 276 439 IPR036259 -
Stsc90891g00003 441 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90891g00003 Stsc-Chr90891 5610 11174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90891g00003 1 395 Inorganic Solute Cotransporters AT2G32830 78.734 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90891g00003 K08176 - tcc:18602672 640.188