Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90890g00015 ATGGCATCATTCTTCTTGATCATCATGGTCTCAACATCATTGCTACTAATTCCCAACTCTGAAGGCAGAGAATTTTTGGTTGGAGGCAGTGAAGATTCATGGAATGTTCCACTTCCATCACCAGATTTTCTCAACCATTGGGCCGGCACCCAACGCTTCGAAATCGGCGATGCTCTCATATTCAAGTACAACAACATGACAGAATCGGTGCAGATGGTGCCTAAGGAGGACTATGAAAGTTGTTATGAGAGGGTTGGTGATGATCACCAGAGTTTCAATGATGGAAATACCAAAGTGATTTTGAGGAGTTCAGGGCCAATTTACTTCATAAGTGGAAAAGAGTCTCATTGCCACATGGGTTTGAAGCTTGTTGTGGTTGTTATGTCTTCCATGCACCACCACCAGCAACCAACTTCTCCTAATCATTCATTGCCTCTGCCTCCCTCACCCTCACCGGCGAGTAATGAAGGCGCTCTTGCTTCCACTCCGGCCACCGAATTTATGATGGGTTTGGGAGTTTCATTGGTCATGTTGTTCTACCTTGCTATTTGA 552 0.4511 MASFFLIIMVSTSLLLIPNSEGREFLVGGSEDSWNVPLPSPDFLNHWAGTQRFEIGDALIFKYNNMTESVQMVPKEDYESCYERVGDDHQSFNDGNTKVILRSSGPIYFISGKESHCHMGLKLVVVVMSSMHHHQQPTSPNHSLPLPPSPSPASNEGALASTPATEFMMGLGVSLVMLFYLAI 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90890g00015 183 PANTHER BLUE COPPER PROTEIN 24 139 IPR039391 GO:0009055
Stsc90890g00015 183 FunFam Cupredoxin superfamily protein 22 133 - -
Stsc90890g00015 183 Pfam Plastocyanin-like domain 34 120 IPR003245 GO:0009055
Stsc90890g00015 183 ProSiteProfiles Phytocyanin domain profile. 23 129 IPR003245 GO:0009055
Stsc90890g00015 183 SUPERFAMILY Cupredoxins 22 128 IPR008972 -
Stsc90890g00015 183 Gene3D - 23 140 IPR008972 -
Stsc90890g00015 183 MobiDBLite consensus disorder prediction 134 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90890g00015 Stsc-Chr90890 54147 54969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90890g00015 20 172 Phytocyanin Superfamily AT5G57920 41.176 2.12e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90890g00015 - - pcin:129298565 149.443