Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90889g00008 ATGGAATCCAACATTCTGCCCTTTTTCCTCACCTTTTTCCTACTCATCACCATTATCCATGCACAAGAATCTCTTGGAACTTACATAGTTCAACTACACCCTCATGGCAAAACCAGCACTCTCTTCACCTCCAAACACAACTGGCACCTCTCCTTCATTCAACAAACCATCTCTTCCGAGGACGACCCCTCCTCTCGCCTCCTCTACTCCTACCGCTCCGCCATGGACGGTTTCGCAGCTCGCCTCACCGAATCCGAGCTCAAATACTTACAAAACATGCCTGATGTTCTCTCCATCAAACCCGACAGGTTGCTTCAGCTTCAAACAACTTACTCTTACAAATTCTTGGGGCTTAACCCTGCCAGAGAAAACGGTTGGTACCAATCCGGATTCGGCCGGGGAAACATAATCGGAGTTCTAGACACCGGAGTGTGGCCGGAGAGTCCTAGCTTCAACGATCAAGGGATGCCACCGATTCCGAAGAAATGGAAAGGTATCTGCCAACATGGACAAGCCTTCAACTCTTCTCATTGTAACAGAAAACTCATTGGTGCCAGATTCTTCACAAAAGGCCACCTTGCTGTTTCGCCTTCAAAGATTCCGGAGTATCTCTCTCCAAGAGATTCCTCTGGCCACGGCACGCATACCTCGTCCACAGCCGGTGGCGCACCGGTCACCATGGCTAACGTGTTGGGGTATGCGTCCGGCGTGGCCAGAGGAATGGCACCGGGTGCTCACATTGCAGTTTACAAGGTCTGCTGGTTTAATGGCTGCTACAATTCGGACATCATGGCTGCCATGGATGTCGCGATTCGTGACGGTGTGGATGTGCTTTCTTTGTCGTTAGGCGGCTTCCCGGTGCCTCTCTTCGACGACAGCATCGCCATTGGAAGCTTCAGAGCAATGGAGCATGGAATTTCGGTTATTTGTGCAGCAGGGAATAACGGACCTACTGCAATGTCTGTTGCCAATGAAGCTCCATGGATCGCCACCATCGGAGCAAGTACACTGGATAGAAAGTTCCCGGCTCTCGTCCGTCTGGCGAACGGGAAGATTCTCTACGGAGAATCTATGTATCCGTTCGACAGGCGAACGCGAGCCGGAGAAGAACTCGAGGTGGTTTATTTGTCTAATGAAGACACAGAGTCTCAGTTTTGCCTGAGAGGATCTCTTCCAAGGGAGAAGGTGGAAGGGAAGATGGTGGTTTGTGACAGAGGTGTTAATGGCAGAGCAGAGAAGGGACAAGTTGTGAAGGAAGCTGGTGGTGCTGCCATGATTCTGGCGAATACAGAGTTGAATTTGGATGAAGATTCTGTGGATGTTCATCTTCTTCCTGCAACTCTGGTAGGGTTTGATGAATCAGTTATCTTGAAAAGTTACATAAACTCTACGGCCAAGCCTCTGGCTCGAATTCAATTCGGAGGAACTGTGATTGGAAGGGCTAGGGCTCCACAGGTGGCAAGGTTTTCGGCCCGCGGGCCCAGTTATACCAATCCTTCCATTCTTAAACCGGATGTTATAGCTCCAGGAGTTAACATAATTGCGGCTTGGCCTCAGAACCTCGGCCCCACCGGGCTTCCAGAAGATTCTAGAAGAGTAAACTTTTCTGTTATGTCTGGTACTTCAATGTCTTGTCCTCATGTTAGTGGAATTGCGGCTTTAATCCGCTCGGCTCACCCTGCATGGTCCCCTGCGGCCGTCAAATCAGCTATCATGACGACTGCAGAGGTAACAGACCATGCAGGGAGGCCTATCCTCGACGAGGAGAAGCCGGCTAGCGTTTTCGCTACCGGCTCGGGGCATGTGAACCCTCAGAGAGCATTGAATCCGGGGCTAGTTTATGATATTAGGCCACAGGATTATGTGACACATCTTTGCAGCCTTGGATACACAATGTCAGAGGTGTTTAGCATAACACATAAGAATGTGAGTTGTCATGAGATGTTGAAGGTGAATAGAGGGTTCAGCCTTAACTATCCTTCATTCTCGGTGATTTTTAAGGATGGGATGAGGAGGAAGATGTTTAGCAGAAGGGTTACAAATGTTGGAGGCCCTAATTCCATTTACTCGGTGGAGGTTATGGCACCAGAAGGAGTGAAGGTGATTGTGAAACCAAAGAAGCTCTTCTTCAAGAAAACAAATCAAAGCTTGAGTTATAGGGTTTGGTTTTTGTCAAGGAAAAGGGTTAAGAAAATTGGTGATGAAATGGAATTTGCACAAGGCTACTTGACTTGGTTGCACTCCCAGAAAGGTTCTTATAGGGTTAGAAGCCCAATAGCAGTGACTTGGAAATCAAAGTAG 2301 0.4872 MESNILPFFLTFFLLITIIHAQESLGTYIVQLHPHGKTSTLFTSKHNWHLSFIQQTISSEDDPSSRLLYSYRSAMDGFAARLTESELKYLQNMPDVLSIKPDRLLQLQTTYSYKFLGLNPARENGWYQSGFGRGNIIGVLDTGVWPESPSFNDQGMPPIPKKWKGICQHGQAFNSSHCNRKLIGARFFTKGHLAVSPSKIPEYLSPRDSSGHGTHTSSTAGGAPVTMANVLGYASGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDVLSLSLGGFPVPLFDDSIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWIATIGASTLDRKFPALVRLANGKILYGESMYPFDRRTRAGEELEVVYLSNEDTESQFCLRGSLPREKVEGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTELNLDEDSVDVHLLPATLVGFDESVILKSYINSTAKPLARIQFGGTVIGRARAPQVARFSARGPSYTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMSCPHVSGIAALIRSAHPAWSPAAVKSAIMTTAEVTDHAGRPILDEEKPASVFATGSGHVNPQRALNPGLVYDIRPQDYVTHLCSLGYTMSEVFSITHKNVSCHEMLKVNRGFSLNYPSFSVIFKDGMRRKMFSRRVTNVGGPNSIYSVEVMAPEGVKVIVKPKKLFFKKTNQSLSYRVWFLSRKRVKKIGDEMEFAQGYLTWLHSQKGSYRVRSPIAVTWKSK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90889g00008 766 SUPERFAMILY Protease propeptides/inhibitors 43 106 - -
Stsc90889g00008 766 FunFam Subtilisin-like protease SBT1.5 134 350 - -
Stsc90889g00008 766 FunFam subtilisin-like protease SBT1.5 338 478 - -
Stsc90889g00008 766 ProSiteProfiles Serine proteases, subtilase domain profile. 110 608 - -
Stsc90889g00008 766 SUPERFAMILY Subtilisin-like 107 612 IPR036852 GO:0004252|GO:0006508
Stsc90889g00008 766 Gene3D Peptidase S8/S53 domain 136 621 IPR036852 GO:0004252|GO:0006508
Stsc90889g00008 766 Pfam Peptidase inhibitor I9 27 107 IPR010259 -
Stsc90889g00008 766 CDD Peptidases_S8_3 105 575 IPR034197 -
Stsc90889g00008 766 CDD PA_subtilisin_like 345 471 - -
Stsc90889g00008 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 108 IPR037045 -
Stsc90889g00008 766 Gene3D - 625 763 - -
Stsc90889g00008 766 Gene3D - 338 478 - -
Stsc90889g00008 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Stsc90889g00008 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 761 IPR045051 -
Stsc90889g00008 766 FunFam Subtilisin-like protease SBT1.9 17 108 - -
Stsc90889g00008 766 Pfam PA domain 373 452 IPR003137 -
Stsc90889g00008 766 Pfam Subtilase family 132 579 IPR000209 GO:0006508|GO:0008236
Stsc90889g00008 766 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Stsc90889g00008 766 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Stsc90889g00008 766 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Stsc90889g00008 766 Pfam Fibronectin type-III domain 657 761 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90889g00008 Stsc-Chr90889 39167 41467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90889g00008 7 765 Subtilisin-like Serine Gene Family AT1G04110 68.093 0.0 1095
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90889g00008 - - gmx:100790205 1286.17