Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90888g00011 ATGTCTGGTGTGGGGCCCATATCTCAGGATTGGGAGCCAGTGGTGATAAGGAAGAAGGCACCAAACGCTGCGGCCAAGAAGGATGAGAAAGCTGTCAACGCTGCTCGCCGTGCCGGTGCTGAGATTGAAACCGTCAAGAAATCAAATGCTGGAACAAATAGAGCTGCCTCTAGTAGCACCTCTTTGAACACCAGGAAGCTTGATGAAGAAACTGAGAATCTTCACCACGACCGCGTACCAACTGAGCTAAAGAAAGCCATCATGCAGGCCCGTCTAGACAAAAAACTTACTCAGGCTCAGCTCGCTCAG 309 0.5081 MSGVGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETVKKSNAGTNRAASSSTSLNTRKLDEETENLHHDRVPTELKKAIMQARLDKKLTQAQLAQ 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90888g00011 103 MobiDBLite consensus disorder prediction 46 64 - -
Stsc90888g00011 103 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 9 103 - -
Stsc90888g00011 103 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Stsc90888g00011 103 MobiDBLite consensus disorder prediction 65 79 - -
Stsc90888g00011 103 Gene3D - 71 103 IPR010982 GO:0003677
Stsc90888g00011 103 MobiDBLite consensus disorder prediction 43 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90888g00011 Stsc-Chr90888 60250 62748 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Stsc90888g00011 MBF1 2.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90888g00011 K03627 - aew:130789500 188.734