Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90885g00012 ATGGGGATTGGTGGAAGTGGAAGCACCTCCGCCAGCGGCAGCGATGAATCGAAGGTGGGTCCCTACTATGGAACGTTTCAAGGCGTGGCCAACTTGTATCCTGGTGAGGATCAGGGTCATAATTATTACCAAGGATCCAGCGTCCTTCCTGTTTATTATGCCGTTCTTGAGGGACACCCCATAAGACAACGTCGTCTTCCTTGTTGTGGACTTGGTCTGGGTTGGTGCTTGTTTATATTGGGATTCTTTCTTGGGGGCATCCCCTGGTATTGCGGAACTTTCTTGCTTCTATTTACGCGGGTGGATTACCGAGAAAAGCCTGGATTCATTGCATGCACACTTGTTTCCCTCATAATTGCGATAGCCATTACCTTTGGCTCCAGTCATCGGCATGTTGTTTGGTGGACATGA 411 0.4915 MGIGGSGSTSASGSDESKVGPYYGTFQGVANLYPGEDQGHNYYQGSSVLPVYYAVLEGHPIRQRRLPCCGLGLGWCLFILGFFLGGIPWYCGTFLLLFTRVDYREKPGFIACTLVSLIIAIAITFGSSHRHVVWWT 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90885g00012 136 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 21 134 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90885g00012 Stsc-Chr90885 57436 58863 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90885g00012 22 134 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.702 2.65e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90885g00012 - - ahf:112714307 186.808