Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90879g00006 ATGGGCGGCATAGGTAAGACAACTATCGCTAGAGCAGTATACGAAGCCATCCGAGGTGAATTCAAAGCTTGTTGCTTCATGAGAAACGTTAGAGAAATGTCTGAAAAAAATGGCTTTGTTCAGTTACAAAGAGACCTTCTTGCATCTTTAAGCATGAGTAGTAGTTATTTTCATGACACAGAAGATGGAAAAAACATAATAAAAAATGCTTTTTTCAATAAGAAGGTTCTGCTTGTCCTTGATGATGTAAGTGAGGTGAAGCAATTAGAGAATTTGGCAGAGGTTCAAGATTGGTTTGGTCCCGGAAGCAGAATAATAATCACAGCTAGAGATATGCACTTGCTAGACATACATGGAGTGCATGTAACTTATGAAGCTAAAGGGTTGGATCAAGAAGAAGCTTATAATCTATTTTGTTTGAAAGCCTTTAAACAACTTGAACCTAAAGAAGGGTATTCTTCTTTGTCTAAAGAAGTTGTGAAATATACTAAGGGTCTTCCTTTGGCAGTTGAGAAATGGGGAGGCATATTTGTGTATGAAGAATCTCCTAGTAACCCGGGAAAACGCAGCAGGCTGTGGTCTAAAGATGACATTCACCAAGTATTGATAAATGACATGGGAACAGAAGCAATTCGAAGTATGGTTCTAAGCTTTGGACATGATGCATTTTATTGGTTTTGGAGTAAGCCCTTCGAAGCACATTGGAGCATTGAAGCCTTCTCAAAGATAACTCAGTTAAGATATCTCAGTTTACCATGCATGGAACTTCCCCTTGGCCTCAACCACCTTCCAAGATCATTGAAAGTTCTGCATTGGGATTTCTGTCCTTTGTAA 834 0.3873 MGGIGKTTIARAVYEAIRGEFKACCFMRNVREMSEKNGFVQLQRDLLASLSMSSSYFHDTEDGKNIIKNAFFNKKVLLVLDDVSEVKQLENLAEVQDWFGPGSRIIITARDMHLLDIHGVHVTYEAKGLDQEEAYNLFCLKAFKQLEPKEGYSSLSKEVVKYTKGLPLAVEKWGGIFVYEESPSNPGKRSRLWSKDDIHQVLINDMGTEAIRSMVLSFGHDAFYWFWSKPFEAHWSIEAFSKITQLRYLSLPCMELPLGLNHLPRSLKVLHWDFCPL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90879g00006 277 Gene3D - 128 206 IPR042197 -
Stsc90879g00006 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 178 IPR027417 -
Stsc90879g00006 277 Gene3D - 1 122 IPR027417 -
Stsc90879g00006 277 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 174 277 IPR044974 GO:0006952
Stsc90879g00006 277 Pfam NB-ARC domain 1 180 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90879g00006 Stsc-Chr90879 41953 43114 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90879g00006 1 183 WRKY Transcription Factor Family AT5G45050 34.783 1.61e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90879g00006 - - aip:107635063 299.286