Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90876g00007 ATGAGGTTGTATACCGAGGCGACCGACGGATCCTATATAGAGACCAAAGAGAGTGCCTTAGTATGGCATTATTGCGACGCGGATCCTGATTTCGGATCATGGCAAGCCAAGCAGCTGCTAGATCACCTTGAAAGTGTTGTTGCAAATGAGCCTGTAGTTGCTAAGAAGGGAAAGCATATCATTGAAGTAATGCCACAGGGGATTACTAAAGGACTAGTTGCAGAGGAAGTTCTTTCTTCAATGAGCGAAAATGGGAAATCACCGGATTTTGTATTGTGCATTGGGGATGATAGGTCAGATGAGGACATGTTTGAGAGCTTATTAACCAAAGCTTATGGTGGAAGTTCTCCGCGGGCGCTGGAGATCTTTTCATGCACTGTTGGTCAGAAACCAAGTAAAGCTAATTACTACTTAGATGATACAGTGGATGTGGTGAGGTTACTCCAAGCTCTTGGTACCTCAATGCAAAGTAACTTGTGCAGGAAGCAAAGCACAGAGCATGGATAG 507 0.4458 MRLYTEATDGSYIETKESALVWHYCDADPDFGSWQAKQLLDHLESVVANEPVVAKKGKHIIEVMPQGITKGLVAEEVLSSMSENGKSPDFVLCIGDDRSDEDMFESLLTKAYGGSSPRALEIFSCTVGQKPSKANYYLDDTVDVVRLLQALGTSMQSNLCRKQSTEHG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90876g00007 168 Gene3D - 33 167 IPR023214 -
Stsc90876g00007 168 FunFam Trehalose-6-phosphate synthase 10 34 162 - -
Stsc90876g00007 168 Pfam Trehalose-phosphatase 1 140 IPR003337 GO:0003824|GO:0005992
Stsc90876g00007 168 NCBIfam trehalose-phosphatase 8 151 IPR003337 GO:0003824|GO:0005992
Stsc90876g00007 168 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 152 IPR001830 GO:0003824|GO:0005992
Stsc90876g00007 168 SUPERFAMILY HAD-like 2 152 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90876g00007 Stsc-Chr90876 20951 21529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90876g00007 1 158 Trehalose Biosynthesis Gene Families AT1G23870 63.291 1.74e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90876g00007 K16055 - ccaj:109803620 255.758