Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90874g00013 ATGGGTTATTGTGGGGGACTTCTAAAAAGAGGAAGCTTATTTTATGCCTTGAGCATTGATGATGTAGCTAAGGAGCTAAGCTGGAGCAAGAGGAGATGTAACAAGCAACAACATTTTGTTGAACTCAGATTTGGAACTGCTAGACTTCTTGATCCTGATTCTTCAAATCAGACATTGCAAGTTGGAACATATGGATACCTTGCACCAGAGTTGGCCTACACAATGAGAGTGACAGAAAAGTGTGATGTATACAGTTTCGGAGTGGTGGCATTGGAAACATTAATGGGAAGGCATCCAGGAGAGCTAATCTTGTCTTTGTTGGACTCTTCTAACAATAAAAACATAATGGTGAAAGATCTCTTGGATTCACGCATCCGTATACCATTATGTCAGAGAGACACTGAAGCAATAGTTAAGGTGCTAAAATTGGCATTGGCATGCTTGCGCTCTAACCCAAAGTCAAGACCATCAATGCAGCAAGTGGCTCATGAACTTACTAATTTCAAACAATCATCAGTGTCTTTGCCTTTTTCTGAAATCACAGTTCATCAGTTGATAGCTTGA 564 0.4025 MGYCGGLLKRGSLFYALSIDDVAKELSWSKRRCNKQQHFVELRFGTARLLDPDSSNQTLQVGTYGYLAPELAYTMRVTEKCDVYSFGVVALETLMGRHPGELILSLLDSSNNKNIMVKDLLDSRIRIPLCQRDTEAIVKVLKLALACLRSNPKSRPSMQQVAHELTNFKQSSVSLPFSEITVHQLIA 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90874g00013 187 Gene3D Transferase(Phosphotransferase) domain 1 18 179 - -
Stsc90874g00013 187 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90874g00013 187 PANTHER LEUCINE RICH REPEAT KINASE 2 43 169 - -
Stsc90874g00013 187 SUPERFAMILY Protein kinase-like (PK-like) 44 176 IPR011009 -
Stsc90874g00013 187 Pfam Protein kinase domain 44 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90874g00013 Stsc-Chr90874 55272 56532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90874g00013 44 175 Receptor kinase-like Gene Family AT1G75820 34.507 5.36e-19 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc90874g00013 Pkinase 5.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90874g00013 - - gmx:102667972 197.593