Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90873g00007 | ATGTCATCAAACCATGGACGTGGCCACCATCCCCGCTCAATTTGGAGCAAGCTATGTTTCTCTAACCCAAGTTGGGATTCAGATGATGATGATGATTTCGAATTAGATACTATATTCTATGTTTATTGTCCAGCGCCATCTGTTGAAATTCATCAACCACCACCACCACCAGAACCTGAACCTCAACCTGAATATGACTTGGAATTTTTATCCCAACTGCTGCCACCTCCGCCGCCACCACCACCACTGATGCCTTCTTCGGTTGTTCATGGCAGGAGGATGGATATTGAACCAGTCAGAAGCATTGGGCTGATTGACATCTTTTCTGAGCAACAGAGGGACCAACTATCTAACTGCCCAATCTGTACGGACGAGTTTGAAATGGGAGAGATTGTGTGCATGCTGCCCTGCAACCATGCCTTCCATTTTTCCTGCATCAATCGCTGGCTGGAAACTAGTCTTACCTGCCCAGTTTGCCGGCAGGAGTTGGGTAACAATGTTTCTCCTTGCGACATCTGGCGAGACTATTTCTCGCGGCACGGGGAAGAATTTGAAGCATTTAGCAGAGCTGCGAGTGATGAAAACTCAGAGGAAGATGAGCAGTATGACAGTGCAAACGATGAGATTGATGATGATTTCATTATGGAGAGAATTCGGATACTACTGTAG | 669 | 0.4649 | MSSNHGRGHHPRSIWSKLCFSNPSWDSDDDDDFELDTIFYVYCPAPSVEIHQPPPPPEPEPQPEYDLEFLSQLLPPPPPPPPLMPSSVVHGRRMDIEPVRSIGLIDIFSEQQRDQLSNCPICTDEFEMGEIVCMLPCNHAFHFSCINRWLETSLTCPVCRQELGNNVSPCDIWRDYFSRHGEEFEAFSRAASDENSEEDEQYDSANDEIDDDFIMERIRILL | 222 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90873g00007 | 222 | SMART | ring_2 | 119 | 159 | IPR001841 | - | |
Stsc90873g00007 | 222 | MobiDBLite | consensus disorder prediction | 188 | 208 | - | - | |
Stsc90873g00007 | 222 | SUPERFAMILY | RING/U-box | 118 | 168 | - | - | |
Stsc90873g00007 | 222 | CDD | RING-H2_PA-TM-RING | 119 | 160 | - | - | |
Stsc90873g00007 | 222 | Coils | Coil | 188 | 208 | - | - | |
Stsc90873g00007 | 222 | Pfam | Ring finger domain | 118 | 160 | IPR001841 | - | |
Stsc90873g00007 | 222 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 98 | 166 | IPR013083 | - | |
Stsc90873g00007 | 222 | PANTHER | SI:CH211-59O9.10 | 109 | 163 | - | - | |
Stsc90873g00007 | 222 | ProSiteProfiles | Zinc finger RING-type profile. | 119 | 160 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90873g00007 | Stsc-Chr90873 | 54295 | 55701 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90873g00007 | 107 | 163 | C3H Transcription Factor Family | AT1G14200 | 36.842 | 1.64e-11 | 59.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90873g00007 | K11982 | - | tpra:123908673 | 83.9593 |