Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90864g00001 ATGGCGGTGGTGTTGCCCTGGGACCGCGATAAGGGTTTGACAGTGGCGCTAGATTCGACGGGGAAGGTGGAGGACGTTGATGATAACGATAATAGCAACCTTCATGTCTTCGTATTTCATCGTTGCGGCGATGCAGAAAGCAATGTCCGCAATAACCGTGGCGGTGAGATGCCTGACGATCTCAAATTTCGGTGGCTTGAGTTGTACAATCTTGTGAACGAGCACGATAACTTGACGTCGACGATAGTGCAAGTAGCGCAAGAAAGAGGGCTAGATGAGAAGCTTCAAAGGGTAGGGGTAGTGGTCCAGCATCCTAATCCTGGAGAGATAACCTGTGGCATCTATTTTGAAAGGTATCCTTATACTAAGATTCAAATTGCTACTTGTGGCCATCCCTATTGTTTTTCTTGTTGGGCAGGATTTATTAGCACATCAATTAACGATGGTCCTGGATCCGATCCCACTCATGGTGTTGTTGTTGATCAAGATATGATTAATCTCTTAGCACTTGATGAAGATAAATAA 525 0.4533 MAVVLPWDRDKGLTVALDSTGKVEDVDDNDNSNLHVFVFHRCGDAESNVRNNRGGEMPDDLKFRWLELYNLVNEHDNLTSTIVQVAQERGLDEKLQRVGVVVQHPNPGEITCGIYFERYPYTKIQIATCGHPYCFSCWAGFISTSINDGPGSDPTHGVVVDQDMINLLALDEDK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90864g00001 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 165 IPR013083 -
Stsc90864g00001 174 SUPERFAMILY RING/U-box 107 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90864g00001 Stsc-Chr90864 4363 4887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90864g00001 75 174 ARIADNE family AT1G65430 47.170 4.99e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90864g00001 K11968 - gmx:100784195 115.931