Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90862g00005 ATGCGTTCAAACAACACTTGTTCATCTGCAGGAGGCAGCAGCGGGGTGACCGGTCGGCACCCTGTGTACCGAGGAGTGAGGCGCAGGAGCAGTGGGAAATGGGTGTCTGAAATCAGGGAGCCCAAGAAACCTACAAGGATTTGGCTCGGCACTTTCCCCACTCCTGAAATGGCTGCTATTGCTTATGATGTCGCCGCTCTTGCTCTTAAGGGTAACGCTGCAATCCTTAACTTCCCCGACTCCGCTTCTTCCCTCCCTGTCCCTGACTCTTCCTCTCCCCGCGATATTCAACTCGCCGCTGCTAGTGCGGCTGCTGCTCTCGCCGCCGCCAATGACGCCCTCCAGCAGGGAACCGCCAATGGCGTTGCGGCGGAGCATCAAGAGGTGCCGTTTGTGGATGAGGACTTGATATTTGATATGCCTAATGTTCTGCTGAATATGGCTCAAGGAATGCTCCTTAGCCCTCCTCGTTTTCACGTTGCCGATGACTACGCCACTGCACCGGAATACACGCCGGAAGATCCACACCTCTGGAGTTACCCTTATTTCCCATGA 555 0.555 MRSNNTCSSAGGSSGVTGRHPVYRGVRRRSSGKWVSEIREPKKPTRIWLGTFPTPEMAAIAYDVAALALKGNAAILNFPDSASSLPVPDSSSPRDIQLAAASAAAALAAANDALQQGTANGVAAEHQEVPFVDEDLIFDMPNVLLNMAQGMLLSPPRFHVADDYATAPEYTPEDPHLWSYPYFP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90862g00005 184 SUPERFAMILY DNA-binding domain 22 81 IPR016177 GO:0003677
Stsc90862g00005 184 MobiDBLite consensus disorder prediction 1 15 - -
Stsc90862g00005 184 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Stsc90862g00005 184 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Stsc90862g00005 184 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Stsc90862g00005 184 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Stsc90862g00005 184 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Stsc90862g00005 184 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 17 180 IPR045277 GO:0003700
Stsc90862g00005 184 Pfam AP2 domain 21 71 IPR001471 GO:0003700|GO:0006355
Stsc90862g00005 184 MobiDBLite consensus disorder prediction 1 35 - -
Stsc90862g00005 184 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Stsc90862g00005 184 FunFam Ethylene-responsive transcription factor 2 21 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90862g00005 Stsc-Chr90862 41887 42441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90862g00005 11 181 AP2-EREBP Transcription Factor Family AT2G36450 59.890 1.02e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc90862g00005 AP2 3.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90862g00005 - - gmx:100813781 221.476