Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90862g00002 ATGTTAATGAACGCCATGGCTCAAAAGTGCTTAATGTTACAGGAGCTTCTGAAAGAGGAGCAAGAGCCATTCCTACTTAACAAGTACATTTCAGATAGGAAAAGGATAAACCAAATCAACAAACATGAAAGCAACACTAACACTTTCCCACTCAATCTCTGCAACAACGCATGCTTCTCTTCCATCCCCACCCCAACCAAATCCCCCCTCTTCCTCCCATCGCCCAAAAACAACAACAAACCCATGTTCCTTCACATTCCTTCAAGAACAGCAGCTCTTCTCCTGGAAGCCGCTCTCAGGATCCACAAACACAAAAACACCACTCACAACAGCTTCTCACTATTCGGTTCCTTCTTCAGGAGACTCAAGCACAACCACCGCAAGCACAAGCTCAAGGCCAGTGCTGAAAATGTGTCGTCCCAGATGGGGTTTCGATCTTCATACTCTGTTTGCTCACAGGCCAACCAACACAAGTCTCTGGACATGGAAACAACATCAAGTACCACTAGTACCAACTATGACCACCATCACCATATTATTCACAATCATGAACCATTCTGTGAAAGCCCATTCCGTTTTGTTCTTCAAACCACCCCCTCCGCCTCCTCCGTACCTTCTTCACCACCCACTCCCCACATTACGCAGGACAAAGAAATTAACGGCAGTGATAGGGTACAAAAATTCCAATCAGGTGAAGTAGAAGAAGAAGAGGAGGAGGATAAGGAACAGTGTAGTCCCGTGTCTGTTCTAGACCCACCCTTCGAGGACGATGACGAAGCGCATGGAAACGACGACGATGAGCAGCATGGTTTCGATTTGGAATGCAGCTATGCCACGATGCAGAGAGCTAAGCAGCACCTATTGTACAAGCTTCGTAGATTCGAGAAGCTTGCAGGGCTAGATCCGGTGGAGCTAGAGAAATTAATGGTGGATCAAGAAGAGGAGGAGGAGGAGGAGGAGGATGAAAGGTTCATGGAAGAAGATGATGGATATGTATACGATGAGGAGAGTGATGAAGAAGCATTATTATGGTGTAAAGAAAATAATGGGCTGAGAGAACAAGTATTTGAATCTCTCTTTGAGTCTTCAAGACTTGAAATCCCAGAAGGGCTTAAGAGGCTTGTATGTGATGTCATTGCAGAGGAAGAGAGGGAAATTGAGTGCTTAGAAGATTATGAGAATAGGGACATGGTGGTGATGAGAAAGGTGTGCAAGAGAATGGAGCTTTGGAAACAAGTGGAGTCAAACACAATTGACATGATGATACAAGAGGATCTTTCTGGAGAAGAGAAAAATGGTTGGAAGCAGAAGAATGTGGATCAAATAAGGGACATGGCTGGGGAGCTTGAACTTGCTATCTTTGGCTTTCTACTTGAAGAATTCTCAGAGGAGGTGGCCAAATTTTGA 1407 0.4499 MLMNAMAQKCLMLQELLKEEQEPFLLNKYISDRKRINQINKHESNTNTFPLNLCNNACFSSIPTPTKSPLFLPSPKNNNKPMFLHIPSRTAALLLEAALRIHKHKNTTHNSFSLFGSFFRRLKHNHRKHKLKASAENVSSQMGFRSSYSVCSQANQHKSLDMETTSSTTSTNYDHHHHIIHNHEPFCESPFRFVLQTTPSASSVPSSPPTPHITQDKEINGSDRVQKFQSGEVEEEEEEDKEQCSPVSVLDPPFEDDDEAHGNDDDEQHGFDLECSYATMQRAKQHLLYKLRRFEKLAGLDPVELEKLMVDQEEEEEEEEDERFMEEDDGYVYDEESDEEALLWCKENNGLREQVFESLFESSRLEIPEGLKRLVCDVIAEEEREIECLEDYENRDMVVMRKVCKRMELWKQVESNTIDMMIQEDLSGEEKNGWKQKNVDQIRDMAGELELAIFGFLLEEFSEEVAKF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90862g00002 468 MobiDBLite consensus disorder prediction 217 231 - -
Stsc90862g00002 468 PANTHER OS04G0572500 PROTEIN 6 465 - -
Stsc90862g00002 468 MobiDBLite consensus disorder prediction 198 216 - -
Stsc90862g00002 468 MobiDBLite consensus disorder prediction 198 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90862g00002 Stsc-Chr90862 19145 21845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90862g00002 13 466 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 35.041 1.27e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90862g00002 - - gmx:100814311 383.259