Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90859g00002 ATGCACAGAGAAGAGGAGGAGGCAAAGAAGAAGAGAGCTGAATATGAGACTGCTCGTTTGTATGCCGAATTTCCTGATCCTGAGGGTGAAAAGTCCAAAGATGGGGTTTCTGGTCCAAAGAAGGGAAGTAGAATGGCGTCCAGCAGCAGGGGTCAAAGTGGAATTCAACAGTTGTTGGCTGCTGAACAAGAGGCAAAGCAGATTGTCGATGCTGCAAAGAATGAAAAATTGGCTAGGCTGAAATATGCCAAAGATGAGGTTGAAAAGGAGATTGCTGAACATCGAGCTCAGCTTGAGTACGAGTTTCAGAAGAAAGTTTCGGAGGGAGGCATACTCAATATGTTAGTGGTGCTGTTGTATCTGTTGCTGGTGCACAAGGGTGGAGCTTTTAGGAGACAATGGGAGGATGGCCACTCCAATTTTTTTTTTATATAA 435 0.4483 MHREEEEAKKKRAEYETARLYAEFPDPEGEKSKDGVSGPKKGSRMASSSRGQSGIQQLLAAEQEAKQIVDAAKNEKLARLKYAKDEVEKEIAEHRAQLEYEFQKKVSEGGILNMLVVLLYLLLVHKGGAFRRQWEDGHSNFFFI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90859g00002 144 Coils Coil 3 23 - -
Stsc90859g00002 144 Gene3D - 45 126 - -
Stsc90859g00002 144 MobiDBLite consensus disorder prediction 20 38 - -
Stsc90859g00002 144 Coils Coil 55 75 - -
Stsc90859g00002 144 MobiDBLite consensus disorder prediction 20 56 - -
Stsc90859g00002 144 Pfam Vacuolar (H+)-ATPase G subunit 52 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc90859g00002 144 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 48 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc90859g00002 144 Coils Coil 77 104 - -
Stsc90859g00002 144 MobiDBLite consensus disorder prediction 42 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90859g00002 Stsc-Chr90859 2875 9250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90859g00002 48 113 Primary Pumps ATPases(2) AT4G25950 60.606 1.11e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90859g00002 K02152 - gmx:100305477 96.2857