Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90855g00010 ATGTGGAGATTTAACCCCTTCACACACAAGGAGGCAGCTGGCCTGGAAGGCCGAGTTATAGATGTCGGCAATCTTAAGATAAATGTCCAGAAAGCCATTGCAGAAGGAGGGTTCTCTTGTGTTTACTTAGCACGTGATGCTTTACATATGTCAAAGCAATATGCATTGAAGCACATAATATGCAATGATGATGAATCACTTGCATTAGTAAAGAAGGAGATATCTGTGATGAAGTCACTGGTAGGACATCCCAATGTAGTCACACTTCATGCCCATGCAATATTTGATATGGGCAGGACAAAAGAGGCATTTCTTGTAATGGAATATTGCGAGAAGTCCCTCGTTAGTGTGCTGGAAAGCCGAGGAGCAGGTTATTTTGATGAGAACCAGGTTCTCTTAATCTTCAGGGATGTATGTAATGCTGTTTTCGCTATGCACTGCCAATTTCCACCCATTGCGCACCGGTAA 468 0.4295 MWRFNPFTHKEAAGLEGRVIDVGNLKINVQKAIAEGGFSCVYLARDALHMSKQYALKHIICNDDESLALVKKEISVMKSLVGHPNVVTLHAHAIFDMGRTKEAFLVMEYCEKSLVSVLESRGAGYFDENQVLLIFRDVCNAVFAMHCQFPPIAHR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90855g00010 155 Pfam Protein kinase domain 29 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90855g00010 155 ProSiteProfiles Protein kinase domain profile. 27 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90855g00010 155 SMART serkin_6 27 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90855g00010 155 PANTHER SERINE/THREONINE PROTEIN KINASE 1 155 - -
Stsc90855g00010 155 Gene3D Transferase(Phosphotransferase) domain 1 9 155 - -
Stsc90855g00010 155 SUPERFAMILY Protein kinase-like (PK-like) 29 155 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90855g00010 Stsc-Chr90855 59008 60589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90855g00010 14 155 MAP Kinase Kinase Kinase AT5G03730 29.452 2.41e-07 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Stsc90855g00010 Pkinase 3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90855g00010 K08853 - gmx:100808507 282.722