Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90854g00003 ATGGAGCTAAGAAGTTGGGTTTGGATGAGTGGTGCGACACTGTTGGCATGTTACTTTGTTGTAAACATATTTGGGAGAAGAGTGAATGAATGGTATTATGATTTCAAGCTGGGACGCAAGCATCGTTTGCTGCCTCCTGGTGACATGGGTTGGCCTCTTATTGGCAAAACCTGGTTCTTTATCAAACACTTGACATCTGGAAATGCCCACCCTGATTTATTCCTCAACGATCTTGTTTCCAAATATGGAAAAGCTAGTATGTACAAGACACACTTATTCATGAATCCTGGAATCGTTGTGTACACGTTAGAGGCATGCAGAAAAGTGTATAGTGATGAAAACAAATTTAAGCTAGCTTATCCCCAAACCACTTTAACTGTGGCACAGTCACCGATAAATGATGTGTCCAGCGAAGAACAAAAGCGTTTCCGGCGACTAATCATTGCCCCCATTATGGGCTACAATGCTTTAGCCAAGTTTCTAGATCGAATGGAGGACACTGTCATTGAATCGCTGGAAGGGATGGCGAGGAGAAGCACGAAACAACCTGTTATGGCGTTCAAAGAGACCATGGCTCTCTCCTTAAGATTCATAGTTCACATTTTTATAGGATCTTACCATCACCGTGATACAATCAAACAAATTGAAGATTTGTTTCGTGCTGTTGATGATGCCTTGTTCTCTTGGCCAATTAATCTCCCTGGTTTTACTTATTATAAAGCACTTAAGAATCGTAAGAAGGTGGAAGAAATAGTTCAATCAATTGTGGAGGAAAGGAAGTTGATGATAAAAAATGGCAATGAAGTAAGAGAGAAGAAAGATCTAGTGGATATTCTTCTGGAAGTGGAGGACGTGAATGGTAGAAAATTGAAGGGTGAAGACATTGTTAACATGTTGGTATTGTTCTTATTGGCTGGTCATGTAAGTACAGCAACGGTTATTATGTGGTCAATGGTATATCTCACCAATAACCCACTCGCCTTCAACAAAGCCAAGGAAGAGATCTTGAAGTCAAGACCACTTTTACAAAAACATTTAAGCATGGAAGAAATTAAGAAAATGACTTACTTTAAGAAGGTAATTAATGAAGTGATACGCGTAACGGAATGGGCAATTCCCTTTTTTCGAGAGGCAACTACCGATGTGGATATCAATGGTTATATCATACCTAAAGGATGGAGAGTGTTTATTTGGCCAAGAGGTTGTCATCGATCATCCGAATATTTTCCAAATTCAGAAGACTTTAATCCTTCCAGATGGGATGACGATGATGATTTTACAAAAGGAGGAGCCTTTTTTCCTTTTGGAGTTGGACCAAGAATGTGCCCTGGAAGAGATCTCACCAAAATTGGAATGTTCATCTTTCTCCATCATTTCGTTCGTAATTATAAGTTTGAACAAATAAATCCAGAATGCCCTGTCTCTTATGTGCCGGTGCCGGTGCCTAAAGATCAGTGTCTTGCCAGGGTGATAAAGGTCTCCATGGAATAG 1491 0.4011 MELRSWVWMSGATLLACYFVVNIFGRRVNEWYYDFKLGRKHRLLPPGDMGWPLIGKTWFFIKHLTSGNAHPDLFLNDLVSKYGKASMYKTHLFMNPGIVVYTLEACRKVYSDENKFKLAYPQTTLTVAQSPINDVSSEEQKRFRRLIIAPIMGYNALAKFLDRMEDTVIESLEGMARRSTKQPVMAFKETMALSLRFIVHIFIGSYHHRDTIKQIEDLFRAVDDALFSWPINLPGFTYYKALKNRKKVEEIVQSIVEERKLMIKNGNEVREKKDLVDILLEVEDVNGRKLKGEDIVNMLVLFLLAGHVSTATVIMWSMVYLTNNPLAFNKAKEEILKSRPLLQKHLSMEEIKKMTYFKKVINEVIRVTEWAIPFFREATTDVDINGYIIPKGWRVFIWPRGCHRSSEYFPNSEDFNPSRWDDDDDFTKGGAFFPFGVGPRMCPGRDLTKIGMFIFLHHFVRNYKFEQINPECPVSYVPVPVPKDQCLARVIKVSME 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90854g00003 496 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 PRINTS E-class P450 group IV signature 387 401 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 PRINTS E-class P450 group IV signature 426 442 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 PRINTS E-class P450 group IV signature 403 421 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 PRINTS E-class P450 group IV signature 354 370 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 PRINTS E-class P450 group IV signature 296 322 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 PRINTS E-class P450 group IV signature 442 460 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 Pfam Cytochrome P450 46 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Stsc90854g00003 496 PANTHER CYTOCHROME P450 26 41 482 - -
Stsc90854g00003 496 Gene3D Cytochrome P450 37 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 SUPERFAMILY Cytochrome P450 38 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00003 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90854g00003 Stsc-Chr90854 14912 19710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90854g00003 2 490 Cytochrome P450 AT1G05160 40.202 2.13e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90854g00003 K04123 - adu:107492701 655.595