Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90854g00002 ATGGTGAGAATAAAAATGGAGGTAGTAATAAGTTGGGTGTTATGGACTATGATGATGAGTGGTGCCACGTTGTTGGCATGCTACTTTGTTGTGAAGACGATGGGGAGAAGGCTCAACGAATGGTATTATGATTTCAAGTTAGGAGACAAGCGTCGATTCTTGCCTCCTGGTGACATGGGTTGGCCTCTTATCGGAAAAACATTGTTCTTTATCAAAGACTTGAGATCTGGAGATTCTTACCCTGATTTATTCATCAATCATCTTGTTTTCAAATATGGAAAAATTGGTATGTACAAGACACACTTGTTTATGAATCCTGGAATATTTGTGTGCACACTAGACGCAAGCAGAAAAATAATGAGCGATGAAAATAACTTTAAACTAGGTTATCCCGAAACCACGTTAACGGTGACGCAATCACCGTTGACCAATGTGTCTGGCGAAGAGCACAAGCGTTTCCGGCGACTGATAATCGCCCCCATTCTGGGCTACAATTCTTTAGCCAAGTTTCTAGATCCAATCGAGGAAATTGTGATTGAATCGTTGAAAGGAATGGCGAGCAGAAGCACAGAACAACCTATTATGCTAATCAAGGAGACCATGGCTCTTTCGTTAAGAATCATCGTTCACATCTTCATAGGATCTTACCATCATCATGATACAATCAAACAAGTTGAACATTTGCTTCATGCCGTTGATGATGCCTTGTTCTCTATGCCAATTAATTTCCCCGGTTTTCCTTATTATAAAGCACTTAAGAATCGTAAGAAGGTGGAAGAAATACTAAAATCGATAGTGGAAGAAAGGAAGGTGATGATAAAAAATGGCAGTGAAGTAACAGAAAAGAAAGATCTTGTAGATATTCTTCTGGAAGTGGAGGATGTGAATGGTCGAAAATTGAAGGGTGAAGACATTGTTAACATGTTGATCACGTTATTTTTGGCTGGCCATGCAGGCACAGCAACGGCATTAATGTGGTCTGTCATATTTCTCACAAAGAACACCTTCGCCTTCCAGAAAGCCAAGGAAGAACAGGAAGAAATCTTGAAGTCAAGGCCACCTTCGCAAAAGCATTTAAGCATAGAAGAAATTAAAAAAATGGTTTACCTTAAAAAGGTATTTAATGAAGTGATGCGCGTAACAGAGTGGGCGATTCCCTTTTGTCGAGAAGCAATTACCGACGTGAATATCAATGGTTATATTATACCTAAAGGATGGAGAGTATTTATTTGGCCAAGAATTTGTCATCTGTCTTCCGAATATTTTTCAAATCCAAAAGACTTCAATCCCTCGAGATGGGATAAAGAAGATTTTACAAAAGGAGGAGCCTTCTTTCCTTTTGGTGTTGGAACAAGGATGTGTGTTGGAAGAGATCTCCTCAAAGTTGAAATGCTCATCTTTCTGCATCATTTCGTCCTTAATTATAAGTTTGAGCAAATAAATCCAGAATGTCCTCTCTCTTATATGATAGCACCGCTGCCTAAAGATAACTGCCTCGGCAAGGTGACAAAGGTCTCCATGGAATAG 1527 0.3949 MVRIKMEVVISWVLWTMMMSGATLLACYFVVKTMGRRLNEWYYDFKLGDKRRFLPPGDMGWPLIGKTLFFIKDLRSGDSYPDLFINHLVFKYGKIGMYKTHLFMNPGIFVCTLDASRKIMSDENNFKLGYPETTLTVTQSPLTNVSGEEHKRFRRLIIAPILGYNSLAKFLDPIEEIVIESLKGMASRSTEQPIMLIKETMALSLRIIVHIFIGSYHHHDTIKQVEHLLHAVDDALFSMPINFPGFPYYKALKNRKKVEEILKSIVEERKVMIKNGSEVTEKKDLVDILLEVEDVNGRKLKGEDIVNMLITLFLAGHAGTATALMWSVIFLTKNTFAFQKAKEEQEEILKSRPPSQKHLSIEEIKKMVYLKKVFNEVMRVTEWAIPFCREAITDVNINGYIIPKGWRVFIWPRICHLSSEYFSNPKDFNPSRWDKEDFTKGGAFFPFGVGTRMCVGRDLLKVEMLIFLHHFVLNYKFEQINPECPLSYMIAPLPKDNCLGKVTKVSME 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90854g00002 508 Pfam Cytochrome P450 55 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 PANTHER CYTOCHROME P450 26 52 485 - -
Stsc90854g00002 508 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Stsc90854g00002 508 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Stsc90854g00002 508 Gene3D Cytochrome P450 48 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90854g00002 508 SUPERFAMILY Cytochrome P450 51 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90854g00002 Stsc-Chr90854 6200 12157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90854g00002 6 503 Cytochrome P450 AT1G05160 40.000 2.22e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90854g00002 K04123 - adu:107492701 652.129