Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90851g00001 ATGGCGATGTCTTATGATTTGCTTAGCAAACTCGATGAGAGCAGCGAAAGCCAATCATCATATAATATCAAAGTTAGGGTACTCAAGAAATGGTCCATAGCTCAGAGTGAAGACAAGTATCAGAAGCCAATGCTGGAAATGGTGCTAATGGATAGTGAGAGAGACACTCAAATGAAGTTGGTCAATGATATTAACTTCCCAAAGACCATATTTAATTTTGTGCCAAACGAGGCCATACTCAGTCATGGGAATGCTCAATCGCATCTCATTGATGTGATGGGGTTATTGACTGGAAAAGGCAATACTATTGAGTTCATGCGTAATCGAAAGACATGCATATATGTCGTTCTTGAGTTAGATGATATGAAGGGGAATGGAAAGGTCCGATGCACTCTATGGGAGGAATTTGCAACTCAAATAGTTAAGCACATTGAGGAGCAGCCAACCTCTGAATATGTGATTATAATGCAATTTGGAGTTATGGGTGTTTCAAACACCAATTATAATACAATTCTGCTTATCAATCCTGACTTGGATGTTGCCAAGGAGTTTCGTCAGAGTGTTATGATGAGCAACATACCTGTGTCCAGTATGTTGCTTCATATCTCGACTGAGCCACCATATTCCCTACAGGAGGATCTTCTCCACAATTGTGTGTATAAGTCAGTGAGCCAGCTAAATGACTCTCTCGAGAATGGAAATTTTGCCACACTGGGCACTGTCATGGATATTGACGCTAAAAATGGGTGGTGGTATAAAAGTTGCAAGTATAGCATTAACCTTAAAGTAGCTGATGAGACTGAGACAGCTTCATTTGTTGTATATGATAAGGAAGCGACTAAATTCTTGGGTTTATCTGCATCTGATCTAAGGGTTGCCCAGCTTACCAGGGGAGGAATCAAGGAGGACTATCCATCTAAAATTGGAGGTTTTTTGAACAAGAGATTCATCTTCAAGGTTTCAGTGAAGTTGGAGGACATGAATGCTTTTCAACCATGCAAAATCGTGGTCCTGAAGCTTTGTGCTGATCCTCCTATGATTGCTGCATTTATAGAGCATCACAAAATATTTGAGCAACATGTGCCATTGGAGATGTCCGAACTTCTTAGCCTGACGACTCAATCTGAAGTAGCGTCCAAGAATGAATCAAACACCAACTCTGCTTATCTCAACACTGGCGGTGGAGGAGATACTTTATGCACTCCTAAGAGAGCACTATTCAGTCGTGAGTTCAGTAAAGATTTGGCTGATGAGTATCTGAATTCTACTGAGCATTCGTCTTCAAAGAGTAGGAAGATTGTAATGGAGAAGGAAGTCATCCCAGCTGAAGAGGATGTTGCTTAG 1344 0.41 MAMSYDLLSKLDESSESQSSYNIKVRVLKKWSIAQSEDKYQKPMLEMVLMDSERDTQMKLVNDINFPKTIFNFVPNEAILSHGNAQSHLIDVMGLLTGKGNTIEFMRNRKTCIYVVLELDDMKGNGKVRCTLWEEFATQIVKHIEEQPTSEYVIIMQFGVMGVSNTNYNTILLINPDLDVAKEFRQSVMMSNIPVSSMLLHISTEPPYSLQEDLLHNCVYKSVSQLNDSLENGNFATLGTVMDIDAKNGWWYKSCKYSINLKVADETETASFVVYDKEATKFLGLSASDLRVAQLTRGGIKEDYPSKIGGFLNKRFIFKVSVKLEDMNAFQPCKIVVLKLCADPPMIAAFIEHHKIFEQHVPLEMSELLSLTTQSEVASKNESNTNSAYLNTGGGGDTLCTPKRALFSREFSKDLADEYLNSTEHSSSKSRKIVMEKEVIPAEEDVA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90851g00001 447 Gene3D - 256 344 IPR012340 -
Stsc90851g00001 447 Gene3D - 64 193 IPR012340 -
Stsc90851g00001 447 SUPERFAMILY Nucleic acid-binding proteins 228 341 IPR012340 -
Stsc90851g00001 447 PANTHER OS03G0429900 PROTEIN 17 380 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Stsc90851g00001 447 SUPERFAMILY Nucleic acid-binding proteins 71 188 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90851g00001 Stsc-Chr90851 1992 6129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90851g00001 67 337 Core DNA Replication Machinery Family AT5G08020 22.756 2.34e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90851g00001 - - ahf:112707100 434.876