Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90850g00002 ATGCCGAGAAAAGGAATGAGAAGTATCTTCTTCAAACCTTCACCTAATCCGCCACGTCACTCACTACCACCGCCACCACCCTCCCCTCTTCGCACCTTCTCCGAGACACTTATGCAAGAAAACATCCATACCGCGGAGTCTCTTATAACCAAGTGGGATTTTTATAACAATAATATTAATAACTCCGTTAATCCACATCACTCAAATTCCACACCACTCTTCAGTGGAACACGCCAGGATGCTAAACAGTACGTTAACGCCGTCAAGGGTCTACAATCCGCTATGAAGTACCTCGTCGCACAGGAACCCTCCTCTGCTGATCTCCTTCGAGCACAGTCTCTCATGCAAATCGCAATGAAAACTCTTGAGAGAGAGTTTCACCAGATCCTAAAGGCCAATAGGAACTACCTCGATCCCGAAACCGTTTCTAACCACTCTGAAACCGTTTCTAACCGTTCCTCAACGGATTTCCGCAACAGTTTCTCCGATTTCGATGAGATTGTTTTGGATGACGAGTTTCGCCTTGCCGGCGAAGGAGTCGCTGATGCCGAGAGAGCTTCCATGCTCGCCGTCAACGATTTGAAGGCGGTCGCGGATTGCATGATTTCCACTGGCTATGGCAGAGAGTGCGTCAGGATTTACGTTTTGGTGAGAAAATCGATCGTTGATGAAGCTCTTTACCATCTTGGAGTGGAGCAGTTGAGCTTCTCGCGTCTCCAGAAGATGGACTGGGACGTGGTTGAGTTAAAGATCAAGCACTGGCTTAACGCTGTGAAGGTTGCCGTCGGAACTCTCTTCAACGGCGAGAGGATACTCTGCGATAGCGTCTTCGCTGCCACAGCACCGGAGAAACGTATCGCAGAGTCCTCCTTCGTGGAGATCGTTAGAGACGGCGCGATGATGCTGTTTGGATTCCCGGAAATGGTTGCAAAGTGCAAGAAAACGCCGGAGAAGATGTTCAGGACTCTTGATATGTACGAAGCGATCTCGGAAAACTGGCCGCAGATCGAGTCCATCTTCTCCTTCGAATCAACCGCCAACATCCGTACGCAGGCGGTTACTTCCTTGGTGAAGCTCGGTGACGCAGTGAGGACAATGCTATCGGACTTCGAATCGGCGATTCAGAAAGAACCGTGCAAGACGACGACTCCCGGCGGTGGAGTTCACTCGCTCACGCGCTACGTGTTGAATTACCTTTCTCTCCTAGCCGACTACAGCGGCGTCCTAGTTGACATCATCGCCGATTATCCGCAGTCTCCGGTACCGGAATCTTTCTACCGAAGCACGATCGTCCATGAGGATAGTACATCGTCGTCCTTCTCCACGTTACCGCCGCCGGCGATCTCAGAGCGAATCGCGTGGCTGATTCTTGTGGTTCTCTGCAAACTCGACGTCAAAGCGGAACGCTATAAGGACGTTGCACTCTCTTACCTCTTCCTCGCTAATAATATGCATTATGTAGTAGAAAAGGTTCGAAAATCAAACCTAGGATTTCTCCTCGGTGAAGAGTGGTTGGCGAAGCACGAAGCGAAGACGAAGGAGTACGTAGCCAAATACGAGCGCGTAGGGTGGAGCAGCGTGCTCAATTCGCTGCCGGAGAATCCCTCGGCGGATATCACAGCGGAGCAAGCTAAGGCTTGCTTCGTTAGCTTCAAGGCAGTGTTTAACAAAGCCTGCGAGAAACAGTCCGGGTGGATTGTACCCGACCCGAAACTGAGAGACGAAATCAAAGGAACGATAGCTTTGAAGCTGGTTTCCAAGTACGGCGAATTCTACGGGAAGAATAATGTCGGATCGGATTCGGTTATACGGATATTACCCGAAGATATAGGAAAGCAAGTGTCAGATATTTTGTGCGGCATTGGAGATTCGAGTAGAGGCTCGTCGCACCCTTCAACAACATGGTCTTCACGTCGCTCCAACGGAAGGTGA 1932 0.5031 MPRKGMRSIFFKPSPNPPRHSLPPPPPSPLRTFSETLMQENIHTAESLITKWDFYNNNINNSVNPHHSNSTPLFSGTRQDAKQYVNAVKGLQSAMKYLVAQEPSSADLLRAQSLMQIAMKTLEREFHQILKANRNYLDPETVSNHSETVSNRSSTDFRNSFSDFDEIVLDDEFRLAGEGVADAERASMLAVNDLKAVADCMISTGYGRECVRIYVLVRKSIVDEALYHLGVEQLSFSRLQKMDWDVVELKIKHWLNAVKVAVGTLFNGERILCDSVFAATAPEKRIAESSFVEIVRDGAMMLFGFPEMVAKCKKTPEKMFRTLDMYEAISENWPQIESIFSFESTANIRTQAVTSLVKLGDAVRTMLSDFESAIQKEPCKTTTPGGGVHSLTRYVLNYLSLLADYSGVLVDIIADYPQSPVPESFYRSTIVHEDSTSSSFSTLPPPAISERIAWLILVVLCKLDVKAERYKDVALSYLFLANNMHYVVEKVRKSNLGFLLGEEWLAKHEAKTKEYVAKYERVGWSSVLNSLPENPSADITAEQAKACFVSFKAVFNKACEKQSGWIVPDPKLRDEIKGTIALKLVSKYGEFYGKNNVGSDSVIRILPEDIGKQVSDILCGIGDSSRGSSHPSTTWSSRRSNGR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90850g00002 643 MobiDBLite consensus disorder prediction 622 643 - -
Stsc90850g00002 643 MobiDBLite consensus disorder prediction 625 643 - -
Stsc90850g00002 643 PANTHER EXOCYST COMPLEX PROTEIN EXO70 33 611 IPR004140 GO:0000145|GO:0006887
Stsc90850g00002 643 Pfam Exo70 exocyst complex subunit 252 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc90850g00002 643 MobiDBLite consensus disorder prediction 16 30 - -
Stsc90850g00002 643 Gene3D Exocyst complex component Exo70 64 624 - -
Stsc90850g00002 643 MobiDBLite consensus disorder prediction 1 30 - -
Stsc90850g00002 643 SUPERFAMILY Cullin repeat-like 74 616 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90850g00002 Stsc-Chr90850 12954 15067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90850g00002 19 620 EXO70 exocyst subunit family AT5G59730 48.465 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90850g00002 K07195 - gmx:100808078 810.831