Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90842g00009 ATGAAAATTGCTGAGGGAGCAGCCAGAGGGCTTGATTATTTGCATAGCTCTGCAGATCCTCCGGTTATATACCGTGATTTCAAATCATCCAATATACTATTGGATGAAGATTTCAATGCAAAACTTTCTGATTTTGGACTAGCTAAGATTGCTCCAAATGGTCAGGGAACTATCACATCCAGGGTGATGGGAACCTTTGGCTACTGTGCACCAGAATATGCTTCTGGTGGTCAATTAACCACAAAATCAGATGTCTACAGTTTTGGTGTGGTGTTCTTGGAAATAATCACTGGCAGGAGAGTAATTGACACTACAAGAGATATTGAGGAGCAAAACTTGATTGAATGGGCACAACCTCTTCTCAAGGATAGAAAGCAGTTCAGTCAAATTGCTGATCCTTTGCTTAATGGCGAGTTCCCTGTGAAGGGTCTATTTCAAGCACTTGCAGTGGCAGCAATGTGTCTCCAAGAGGAACCCGAGAAACGACCTGACATGGACGATGTTGTAACGGCTCTAACAATTCTAGCAGGTAGCAAGACCGACGAAAAAGACGTTTCTGGTGAAATAGCAAAACCTTCCAGGCATGTTGAATCTTTCAGAGCTGCAGAATCATTGAACCATAAAGAGCACAGGGGATAG 639 0.4304 MKIAEGAARGLDYLHSSADPPVIYRDFKSSNILLDEDFNAKLSDFGLAKIAPNGQGTITSRVMGTFGYCAPEYASGGQLTTKSDVYSFGVVFLEIITGRRVIDTTRDIEEQNLIEWAQPLLKDRKQFSQIADPLLNGEFPVKGLFQALAVAAMCLQEEPEKRPDMDDVVTALTILAGSKTDEKDVSGEIAKPSRHVESFRAAESLNHKEHRG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90842g00009 212 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Stsc90842g00009 212 PANTHER OS07G0668900 PROTEIN 1 184 - -
Stsc90842g00009 212 FunFam Serine/threonine-protein kinase PBS1 1 189 - -
Stsc90842g00009 212 Gene3D Transferase(Phosphotransferase) domain 1 1 195 - -
Stsc90842g00009 212 SUPERFAMILY Protein kinase-like (PK-like) 2 170 IPR011009 -
Stsc90842g00009 212 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90842g00009 212 Pfam Protein kinase domain 3 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90842g00009 212 MobiDBLite consensus disorder prediction 183 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90842g00009 Stsc-Chr90842 27780 28770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90842g00009 1 176 Glycoside Hydrolase AT3G07070 67.797 2.67e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Stsc90842g00009 Pkinase 2.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90842g00009 - - vvo:131599912 315.079