Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90840g00013 | ATGTATCATCCAAAGAGTGTCCCTAGTTCAAATTTACTTGGAAGCAATTCATTAGTTCATGGTGGTAGCACAATGGATCCTGGCAATGGAGACAATCTTTCCAACAATCCTAATCTCGCCTCAAAGCAGCGTTTACGGTGGACACATGAGCTACATGAACGCTTTGTTGATGCTGTGGCACAACTTGGTGGACCAGATCGTGCTACACCAAAAGGTGTTCTAAGAGTTATGGGTGTACAAGGCTTAACGATTTACCATGTGAAAAGTCATTTACAGAAATATCGACTAGCAAAGTACCTACCTGATTCCTCGTCTGATGAAGGAAAGAAAGCTGACAAGAAAGAAGCAGGGGATATGCTTTCCAATCTAGATGGTTCACCTGGGATGCAAATCACTGAAGCACTGAAGCTTCAAATGGAGGTGCAGAAGCGCCTACATGAACAATTGGAGGTTCAGAGGCAGCTACAATTGAGGATAGAAGCCCAGGGTAAGTACTTGAAAAAGATAATTGAAGAGCAACAGCGACTCAGTGGGACTCTTCCAGGTGCACCCGGCTCTGGGATTACTGGTCAAGTTCCAGAAGATAGCCCAGATCCTGATAACAAGACTGATCCGGCAACTCCGGACCCGGAGAAAGCAGCCAAAGAGCGTGCCCCAGCAAAGAGTCTTTCCAACGAATCTTTTTCGTCTCACCACGAACCGTTGACGCCAGATTCCGATTCCCCTGCTGACAGCCCCAAAGGGGAAAGATCAACCAAGAGGCAAAAAGTAAGTGCGGAGGCAACATTTTCTAAACAGGATATGGTGCTACCACATCAGATACTGGAGTCGAGCATGTCCTCGTACCAGCAACCAAGCACTGTTTTCCTTACACAAGACCAGTTTGATCCTTCATTGGGTATGACTGCTAGAAATAGTGAGGAACTGGAGAAGGTTGGTGGTGGCGGTAACATTTGA | 957 | 0.4639 | MYHPKSVPSSNLLGSNSLVHGGSTMDPGNGDNLSNNPNLASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKEAGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGTLPGAPGSGITGQVPEDSPDPDNKTDPATPDPEKAAKERAPAKSLSNESFSSHHEPLTPDSDSPADSPKGERSTKRQKVSAEATFSKQDMVLPHQILESSMSSYQQPSTVFLTQDQFDPSLGMTARNSEELEKVGGGGNI | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90840g00013 | 318 | MobiDBLite | consensus disorder prediction | 177 | 269 | - | - | |
Stsc90840g00013 | 318 | MobiDBLite | consensus disorder prediction | 101 | 127 | - | - | |
Stsc90840g00013 | 318 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 39 | 99 | IPR017930 | - | |
Stsc90840g00013 | 318 | MobiDBLite | consensus disorder prediction | 222 | 236 | - | - | |
Stsc90840g00013 | 318 | FunFam | Myb family transcription factor | 41 | 99 | - | - | |
Stsc90840g00013 | 318 | Coils | Coil | 132 | 152 | - | - | |
Stsc90840g00013 | 318 | MobiDBLite | consensus disorder prediction | 101 | 119 | - | - | |
Stsc90840g00013 | 318 | MobiDBLite | consensus disorder prediction | 8 | 38 | - | - | |
Stsc90840g00013 | 318 | Pfam | Myb-like DNA-binding domain | 45 | 95 | IPR001005 | - | |
Stsc90840g00013 | 318 | Pfam | MYB-CC type transfactor, LHEQLE motif | 129 | 175 | IPR025756 | - | |
Stsc90840g00013 | 318 | SUPERFAMILY | Homeodomain-like | 41 | 96 | IPR009057 | - | |
Stsc90840g00013 | 318 | MobiDBLite | consensus disorder prediction | 197 | 219 | - | - | |
Stsc90840g00013 | 318 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Stsc90840g00013 | 318 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 42 | 97 | IPR006447 | GO:0003677 | |
Stsc90840g00013 | 318 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 36 | 306 | IPR044848 | GO:0003700 | |
Stsc90840g00013 | 318 | Gene3D | - | 41 | 100 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90840g00013 | Stsc-Chr90840 | 63979 | 70495 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90840g00013 | 77 | 314 | G2-like Transcription Factor Family | AT2G01060 | 60.400 | 9.23e-81 | 243 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Stsc90840g00013 | Myb_DNA-binding | 2.1e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90840g00013 | - | - | gmx:100786925 | 484.182 |