Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90838g00018 ATGAGTCTAGCAGTACTTGGATTGCCACCATATTGCAATTTCACATCAGATGAAATTGGATATGCAACAAACAACTTTCGCCAATCGAATTTAATAGGAGAAGGATCACAGGGACAGCTATATAAGGGCAAGCTCATAGATGGTTCAATGGTGCTTGTTAACCGTGTAAGGCTAAAACAGAAGAGTTTGAACAGAAACAGTATGCAGAACTTTGAGATGGTGTTACCAAATTTAAGGCACAGGAATTTGGTTAGTGTTTTAGGACACTGCTTCATTAATTGTGAGGACCAATCCCAAACTAGAAGCACAATCTACATTGTATTTGAGCACATCTCAAATGTGTCAACCTTAAAGGACCATCTTTCAGATAGGATGAAAAGGGAAATGCTGAAATGGCCACAAAGAATGGCAATAAGCATAGGCATTGCAAGAGGAATCCAGTTCCTACACACAGGAGTTACTCCTGGAATCTATGGCAACAATTTAAGGATTGAGAACATTCTTTTGGATCATAGTCTCAATGCAAAAGTCAGTGGATACTGTATTCCATTGCCATCAAAGAAAGGCCTTGATAGGAGACAAAATGAACAATGTGTTCCCAGTATTAGTGGCAGCAGTGAAGAAAAGGAAGATATATATCAGTTGGGTGTTATTCTAATTCAAATAATCACTGGCAAGCTAATTACATCTTCACGTGAACTAGAGCAGCTAAAAGATGAGATGGAGAGGGGTTTATTAGAAGGTGCATCTTCAACACCAAGGCTGACAGTTGATCCATTCCTGAGGGGAATTTATGTACAAGAATCTGTGAGAACTGCACTTCAGATCACCATCAATTGTCTCAGCAAGATCACTATTAATCGCCCTTCAGTAGAGGATGTTCTCTGGAATTTGCAGTACTCAATGCAAGTTCAAGAAGCCAGGAGCAGCACTGGGAATAGTCCAAGATTGTAA 954 0.3973 MSLAVLGLPPYCNFTSDEIGYATNNFRQSNLIGEGSQGQLYKGKLIDGSMVLVNRVRLKQKSLNRNSMQNFEMVLPNLRHRNLVSVLGHCFINCEDQSQTRSTIYIVFEHISNVSTLKDHLSDRMKREMLKWPQRMAISIGIARGIQFLHTGVTPGIYGNNLRIENILLDHSLNAKVSGYCIPLPSKKGLDRRQNEQCVPSISGSSEEKEDIYQLGVILIQIITGKLITSSRELEQLKDEMERGLLEGASSTPRLTVDPFLRGIYVQESVRTALQITINCLSKITINRPSVEDVLWNLQYSMQVQEARSSTGNSPRL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90838g00018 317 Pfam Protein kinase domain 27 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90838g00018 317 SUPERFAMILY Protein kinase-like (PK-like) 8 303 IPR011009 -
Stsc90838g00018 317 Gene3D Transferase(Phosphotransferase) domain 1 113 314 - -
Stsc90838g00018 317 ProSiteProfiles Protein kinase domain profile. 26 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90838g00018 317 Gene3D Phosphorylase Kinase; domain 1 5 104 - -
Stsc90838g00018 317 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 308 - -
Stsc90838g00018 317 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 111 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90838g00018 Stsc-Chr90838 66369 69314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90838g00018 1 307 Miscellaneous Gene Families AT3G03770 42.492 5.02e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Stsc90838g00018 Pkinase 5.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90838g00018 - - adu:107489186 547.74