Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90838g00017 ATGTATTCGTGGAATTGTTTGTCAGCAAGGGGATTGACTGATCAGCATCCTGCTTCATATTGCAAGAGAGTGATGGATTCCTTGACAGCTAAGTCACCAGTTCGAAACGGGAAGGACGAATCAGAGATTCATCTAGGCCTAGCTCTTGGTGTTCTTGGAGTTGCTACAGGAGTTACTGGGCTTGTGGCTCTGCTCTTTCTGTTCATGCTAAAGAAGAACAAAGCAAAAATTGCCAAAAAGGATACCATTGATAACAAATCTGATGCAGATAAAATTCCCATCAATCTATATCCAGGACCAAAAATTGATACAAGATGTTCTATAGAAAGAATGAGTCTAGCAGTACTTGGATTGCCACCATATTGCAATTTCACATCAGATGAAATTGGATATGCAACAAACAACTTTCGCCAATCGAATTTAATAGGAGAAGGATCACAGGGACAGCTATATAAGGGCAAGCTCATAGATGGTTCAATGGTGCTTGTTAACCGTGTAAGGCTAAAACAGAAGAGTTTGAACAGAAACAGTATGCAGAACTTTGAGATGGTGTTACCAAATTTAAGGCACAGGAATTTGGTTAGTGTTTTAGGACACTGCTTCATTAATTGTGAGGACCAATCCCAAACTAGAAGCACAATCTACATTGTATTTGAGCACATCTCAAATGTGTCAACCTTAAAGGACCATCTTTCAGATAGGATGAAAAGGGAAATGCTGAAATGGCCACAAAGAATGGCAATAAGCATAGGCATTGCAAGAGGAATCCAGTTCCTACACACAGGAGTTACTCCTGGAATCTATGGCAACAATTTAAGGATTGAGAACATTCTTTTGGATCATAGTCTCAATGCAAAAGTCAGTGGATACTGTATTCCATTGCCATCAAAGAAAGGCCTTGATAGGAGACAAAATGAACAATGTGTTCCCAGTATTAGTGGCAGTGAAGAAAAGGAAGATATATATCAGTTGGGTGTTATTCTAATTCAAATAATCACTGGCAAGCTAATTACATCTTCACGTGAACTAGAGCAGCTAAAAGATGAGATGGAGAGGGGTTTATTAGAAGGTGCATCTTCAACACCAAGGCTGACAGTTGATCCATTCCTGAGGGGAATTTATGTACAAGAATCTGTGAGAACTGCACTTCAGATCACCATCAATTGTCTCAGCAAGATCACTATTAATCGCCCTTCAGTAGAGGATGTTCTCTGGAATTTGCAGTACTCAATGCAAGTTCAAGAAGCCAGGAGCAGCACTGGGAATAGTCCAAGATTGTAA 1281 0.3989 MYSWNCLSARGLTDQHPASYCKRVMDSLTAKSPVRNGKDESEIHLGLALGVLGVATGVTGLVALLFLFMLKKNKAKIAKKDTIDNKSDADKIPINLYPGPKIDTRCSIERMSLAVLGLPPYCNFTSDEIGYATNNFRQSNLIGEGSQGQLYKGKLIDGSMVLVNRVRLKQKSLNRNSMQNFEMVLPNLRHRNLVSVLGHCFINCEDQSQTRSTIYIVFEHISNVSTLKDHLSDRMKREMLKWPQRMAISIGIARGIQFLHTGVTPGIYGNNLRIENILLDHSLNAKVSGYCIPLPSKKGLDRRQNEQCVPSISGSEEKEDIYQLGVILIQIITGKLITSSRELEQLKDEMERGLLEGASSTPRLTVDPFLRGIYVQESVRTALQITINCLSKITINRPSVEDVLWNLQYSMQVQEARSSTGNSPRL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90838g00017 426 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 221 423 - -
Stsc90838g00017 426 Gene3D Phosphorylase Kinase; domain 1 102 211 - -
Stsc90838g00017 426 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 44 417 - -
Stsc90838g00017 426 Gene3D Transferase(Phosphotransferase) domain 1 223 423 - -
Stsc90838g00017 426 Pfam Protein kinase domain 137 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90838g00017 426 SUPERFAMILY Protein kinase-like (PK-like) 115 407 IPR011009 -
Stsc90838g00017 426 ProSiteProfiles Protein kinase domain profile. 136 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90838g00017 Stsc-Chr90838 66369 69314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90838g00017 1 416 Miscellaneous Gene Families AT3G03770 37.678 4.92e-81 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Stsc90838g00017 Pkinase 1.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90838g00017 - - adu:107489186 672.544