Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90835g00009 ATGGCAGCAAAGAGTAGTGACTTGAAGCTTCTGGGTGGATGGTTCAGTCCATTTGCCACAAGGGTGAAGATTGCTCTTAACATCAAAGGATTGGAATATCAGAACTTTGAAGAAGACTTGGAATCCAAGAGTGACCTTCTTCTTCGTTCAAATCCTGTGCACAAGAAAATCCCAGTTCTAATTCATGGTGAGAAATCCATATGTGAATCCTCAATCATAGTTGAATATATTGATGAGGTTTGGTCCAATGGTCCTTCTATCCTTCCCCAAGATGCTTATGACAGAGCAATTGCTAGATTCTGGGTTTCATACATTGATGACAAGTTTTTGGCTTGCATGAAGAACATTCTAGGGGGTGGTGAAGACGAAGACGAGAAGAAGCAACACTTTGAGCAATTGGAAGAAGTGTTTGTAAGGTTGGAAGAGGCATTCAACAAATGTAGGGATGGAAAGCCCTTCTTTGGAGGCAACAACGTTGGATTTATTGACATTACCTTTGGAAGCTTCTTGCCTTTGATACGTGTTATAGAAGAGATTAATGGAAATAAGGTTATCAGCGACGAAAAGTTTCCGGTGTTAGCGAATTGGGCTGGGAATTTTGCTGCGGATTCGGTTGTTGTTGGAACTCTTCCTGAAATTGACAAACTTGTTCTGTTTACTAAGGCTCTTCAGCAAAAATGGGCTGCTGCTAAAGCCGCTGCCAAGTAA 708 0.4153 MAAKSSDLKLLGGWFSPFATRVKIALNIKGLEYQNFEEDLESKSDLLLRSNPVHKKIPVLIHGEKSICESSIIVEYIDEVWSNGPSILPQDAYDRAIARFWVSYIDDKFLACMKNILGGGEDEDEKKQHFEQLEEVFVRLEEAFNKCRDGKPFFGGNNVGFIDITFGSFLPLIRVIEEINGNKVISDEKFPVLANWAGNFAADSVVVGTLPEIDKLVLFTKALQQKWAAAKAAAK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90835g00009 235 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 229 IPR010987 -
Stsc90835g00009 235 Pfam Glutathione S-transferase, C-terminal domain 98 201 IPR004046 -
Stsc90835g00009 235 FunFam Glutathione S-transferase U9 88 230 - -
Stsc90835g00009 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc90835g00009 235 CDD GST_N_Tau 8 81 - -
Stsc90835g00009 235 Gene3D - 88 232 - -
Stsc90835g00009 235 SFLD Main.3: Omega- and Tau-like 4 232 IPR045073 -
Stsc90835g00009 235 CDD GST_C_Tau 92 223 IPR045074 GO:0004364|GO:0006749
Stsc90835g00009 235 SUPERFAMILY GST C-terminal domain-like 79 226 IPR036282 -
Stsc90835g00009 235 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Stsc90835g00009 235 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 215 IPR045073 -
Stsc90835g00009 235 SFLD Glutathione Transferase (cytosolic) 4 232 IPR040079 -
Stsc90835g00009 235 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Stsc90835g00009 235 FunFam Glutathione S-transferase GSTU6 3 88 - -
Stsc90835g00009 235 Gene3D Glutaredoxin 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90835g00009 Stsc-Chr90835 59575 62733 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90835g00009 5 226 Glutathione S-transferase Gene Family AT1G10370 51.570 3.76e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90835g00009 K00799 - gmx:547576 281.182