Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90835g00003 ACAGCCAAAAGTAGTGATGATGACTTGAAGCTTTTGGGTGGATGGTTCAGCCCATTTGCCACGAGGGTGAAGATTGCTCTTAACATTAAAGGATTGGAATATGAGAACATTGAAGAGGACTTGAACTCCAAAAGTGATCTTCTTCTTCGTTCAAATCCAGTGCACAAGAAAATCCCAGTTTTATTTCATGGTGAGAAACCCATATGTGAATCCTCAATCATAGTTGAATATATTGATGAGGTTTGGTCCAATGGTCCTTCTATCCTTCCCCAAGATGCTTATGACAGAGCAATTGCTAGATTCTGGGTATCCTACATTGATGATAAGTTATTGGCTTGCATGAGGGGTATTCTAGCGGGTGGTGAAGATGAAAAGGTAAAAAAGCCACACTTTGAGCAATTGGAAGAAGAAGTGTTTGTGAAGTTGGAAGAGGCATTCAACAAATGCGGTGATGGAAAGCCCTTCTTTGGAGGTAACAATGTTGGATTCATTGACATTACCTTTGGAAGCTTCTTGCCTTTTATGCGTGTCATAGAAGAGATTAATGGAAAGAAGGTTCTTGTCGATGATAAATTTCCCGCATTAGCGAATTGGGCTGCGAATTTTGTTGCAGATTCAGTTGTGATTGAAACTCTTCCTGAGAATGATAAACTTGTTTTGTTTGCTAAGGCTCTTCTGGAAAAATGGGCTGCTGCTGCCGAGTAA 705 0.4043 TAKSSDDDLKLLGGWFSPFATRVKIALNIKGLEYENIEEDLNSKSDLLLRSNPVHKKIPVLFHGEKPICESSIIVEYIDEVWSNGPSILPQDAYDRAIARFWVSYIDDKLLACMRGILAGGEDEKVKKPHFEQLEEEVFVKLEEAFNKCGDGKPFFGGNNVGFIDITFGSFLPFMRVIEEINGKKVLVDDKFPALANWAANFVADSVVIETLPENDKLVLFAKALLEKWAAAAE 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90835g00003 234 CDD GST_C_Tau 93 225 IPR045074 GO:0004364|GO:0006749
Stsc90835g00003 234 FunFam Glutathione S-transferase U9 89 232 - -
Stsc90835g00003 234 Gene3D Glutaredoxin 1 88 - -
Stsc90835g00003 234 Pfam Glutathione S-transferase, N-terminal domain 9 80 IPR004045 -
Stsc90835g00003 234 SFLD Glutathione Transferase (cytosolic) 6 232 IPR040079 -
Stsc90835g00003 234 CDD GST_N_Tau 9 82 - -
Stsc90835g00003 234 SUPERFAMILY GST C-terminal domain-like 80 228 IPR036282 -
Stsc90835g00003 234 SFLD Main.3: Omega- and Tau-like 6 232 IPR045073 -
Stsc90835g00003 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 225 IPR010987 -
Stsc90835g00003 234 Gene3D - 89 234 - -
Stsc90835g00003 234 SUPERFAMILY Thioredoxin-like 8 110 IPR036249 -
Stsc90835g00003 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Stsc90835g00003 234 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 218 IPR045073 -
Stsc90835g00003 234 FunFam Glutathione S-transferase GSTU6 4 89 - -
Stsc90835g00003 234 Pfam Glutathione S-transferase, C-terminal domain 112 204 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90835g00003 Stsc-Chr90835 10403 15809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90835g00003 5 228 Glutathione S-transferase Gene Family AT1G10370 53.744 7.54e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90835g00003 K00799 - gmx:547576 290.041