Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90832g00015 ATGAAGATGAAGATGCAATTGTGCTGCATATTGCTGCTGCTACTGTTTCTGATTCTCTTTACTTCACCAAAACCAGTGATATCTGCTGACACTTCATTCAATGATGATGTTTTGGGCTTGATTGTGTTCAAAGCTGGTTTGGATGATCCAAAGGGTAAGCTTTCTTCATGGAATGAAGATGATTTCACTCCTTGCAATTGGGATGGTGTGGATTGTGACCGTTCAACAAAAAGGGTCAATTCCCTTGTTCTTGATGGTTTCTCTCTTTCTGGCCATATTGATAGAGGAATCTTGAGGCTTCAGAATCTCAAGATTCTTTCACTTGCAAGGAACAACTTCACTGGCACTATAAACCCTGATCTTGCTTCATCACTTGCTGGATTGCAAGTTGTTGACTTCAGTGAGAACAATCTCTCTGGTTCAATCCCTGAAGGGTTCTTCAACCAATGTTCCTCTCTTAGAACAGTTTCCTTTGCCAAGAACAACCTCACAGGTAAGATTCCTGATTCCTTGAGCTCATGTTCCACATTGGTGAATGTTAACTTTTCCTACAATCAAATTTCTGGTATATTGCCATCTGGGTTGTGGTTCTTGAGGGCAATACAGTCATTTGATCTGTCAAATAACTTGCTTGAAGGAGAGATTCCTGAGGGAACTCAGAATCTGTATGATTTGAGAGAGTTGAATTTGCAGAATAATCACTTTAGTGGAAAGATTCCTGAAGGAATTGGAGGCTGCTTGGGTTTGAAATCAGTGGATTTGAGTGGTAATTTTCTATCTGGTGAACTTCCTGAGTCAATGCAAAGGCTCACTTCGTGCACATCACTCAGTTTGCAGAGAAATTTGCTCACCGAAACCGTTCCTGATTGGATTGGAGGCTTGAAAAGTCTAGAGATTTTGGATCTTTCAGCTAATGGATTTTCCGGTTGGATTCCGAAGTCATTAGGAAATTTAGACTCACTTGTTAGGTTGAATTTGTCCAGGAATCGGTTCACAGGAAACTTGCCGGATTCGATGGCGAATTGCACTAAGCTTATGTCATTTGACATAACCCACAATGAATTTTCAGGCCAATTTCCTTGGTGGATATTCATAATGGGTTTACAAGGTTCACCTTTTCATGGTCTTCAGGTGTTGGATTTGTCATCCAATGTGTTTTCGGGTGAGCTTCCTTATGGCATTGGCAACCTTAGCAGTTTGCAAGTGTTGAATGTTTCGGCCAACGAAATCTCTGGTTCGATTCCGGTGACTATAGGAGAACTCAAATCTTTGTACATTCTAGACTTGAGTGACAACAAGCTTAATGGAAGCATTCCTTCTGAAATTCAAGGTGCAAGTTCTCTCAGTGAATTGAGACTACAAAGCAACTTCCTAAGTGGGACAATTCCAACCGAAATCGACAAGTGTTCATCTATTACATCTTTGATACTTTCTCACAACAAGATTACTGGTTCAATCCCAGCATCCATTGCAAACTTAAACAATCTTCAGTATGTTGATTTGTCTTGGAATGAACTCTCTGGAGGTTTACCGAAAGAGCTTACGAATCTTTCGCACCTTCTCGGCTTTAATGTATCCTACAACCACCTTCAAGGTGAGCTACCAGTGGGTGGATTCTTCAACACTATCTCACCCTCCTCTGTCTCCGGTAACTCGTTGTTATGTGGTTCAGTTGTCAATCAATCCTGTCCATCTGATCACCCGAAGCCTATTGTCTTAAACCCGAATTCTTCCAGCTCAAACTCAAGCATTTCGGCCCAGAATCGCCATCACAAGATCATACTTAGTATCTCAGCTCTTATTGCTATAGGTGCAGCTGCTTTTATAGCAGTTGGTGTGGTGGCTATTACTGTCTTAAACATCCATGTTCGCAATTCAATGGCTCGTTCGGCTGCTCAGTTTGCATTCTCTGGTGGTGAGGACTATAGTGGTTCGCCCGAGGATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCAGATGGAGCTCATAATCTTCTTAATAAGGACAGTGAAATAGGCCGTGGAGGATTCGGAGTTGTTTATCGAACTGTCCTTCGAGACGGCCATTCTGTTGCAATCAAGAAGCTTACAGTGTCCAGTTTGATCAAGTCCCAAGAGGACTTTGAGAGGGAAGTGAAGAATCTAGGCAAGGTTAGGCACCAAAACCTCGCGAAACTCGAAGGCTATTACTGGACTTCATCCTTGCAGCTTCTCATTTATGAATACTTATCCAAAGGGAGTCTGCATAAGCTTCTACATGATGATAACAGCAAAGATGTCTTCTCATGGAGACAAAGATTCCGGATTATCCTCGGCATGGCGAAAGGGTTAGCTCATTTGCACCAGATGGACATTATACATTACAATCTTAAGTCAACCAATGTTCTGATTGATTGTTCGGGCGAGGCGAAAATAGGAGACTATGGCCTAGTAAAGCTACTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCATTAGGCTACATGGCTCCAGAGTTTGCTTGCCGGACGGTTAAGATAACCGAGAAATGTGATGTGTATGGCTTTGGAGTCCTTGTTCTTGAGGTGGTGACAGGAAGAAGGCCTGTGGAATACATGGAAGATGATGTGGTGGTTCTTTGTGACATGGTGAGGGGTGCATTGGAGGAAGGCAAGGTTGAGCAATGTGTTGATGGTAGGTTACTTGGTAATTTCGTCGCCGAAGAGGCGATTCCTGTGATCAAATTGGGGCTGATCTGTGCATCTCAGGTTCCGTCGAACCGGCCGGATATGGCCGAGGTAATCAACATACTAGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAGTTAGAATGA 2868 0.4282 MKMKMQLCCILLLLLFLILFTSPKPVISADTSFNDDVLGLIVFKAGLDDPKGKLSSWNEDDFTPCNWDGVDCDRSTKRVNSLVLDGFSLSGHIDRGILRLQNLKILSLARNNFTGTINPDLASSLAGLQVVDFSENNLSGSIPEGFFNQCSSLRTVSFAKNNLTGKIPDSLSSCSTLVNVNFSYNQISGILPSGLWFLRAIQSFDLSNNLLEGEIPEGTQNLYDLRELNLQNNHFSGKIPEGIGGCLGLKSVDLSGNFLSGELPESMQRLTSCTSLSLQRNLLTETVPDWIGGLKSLEILDLSANGFSGWIPKSLGNLDSLVRLNLSRNRFTGNLPDSMANCTKLMSFDITHNEFSGQFPWWIFIMGLQGSPFHGLQVLDLSSNVFSGELPYGIGNLSSLQVLNVSANEISGSIPVTIGELKSLYILDLSDNKLNGSIPSEIQGASSLSELRLQSNFLSGTIPTEIDKCSSITSLILSHNKITGSIPASIANLNNLQYVDLSWNELSGGLPKELTNLSHLLGFNVSYNHLQGELPVGGFFNTISPSSVSGNSLLCGSVVNQSCPSDHPKPIVLNPNSSSSNSSISAQNRHHKIILSISALIAIGAAAFIAVGVVAITVLNIHVRNSMARSAAQFAFSGGEDYSGSPEDDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTVLRDGHSVAIKKLTVSSLIKSQEDFEREVKNLGKVRHQNLAKLEGYYWTSSLQLLIYEYLSKGSLHKLLHDDNSKDVFSWRQRFRIILGMAKGLAHLHQMDIIHYNLKSTNVLIDCSGEAKIGDYGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGRRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDGRLLGNFVAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEELE 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90832g00015 955 SUPERFAMILY L domain-like 295 556 - -
Stsc90832g00015 955 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Stsc90832g00015 955 FunFam Leucine-rich repeat receptor-like protein kinase 33 192 - -
Stsc90832g00015 955 Gene3D Transferase(Phosphotransferase) domain 1 749 953 - -
Stsc90832g00015 955 Gene3D Ribonuclease Inhibitor 314 570 IPR032675 -
Stsc90832g00015 955 Gene3D Ribonuclease Inhibitor 33 313 IPR032675 -
Stsc90832g00015 955 Pfam Leucine rich repeat 447 506 IPR001611 GO:0005515
Stsc90832g00015 955 Pfam Leucine rich repeat 249 306 IPR001611 GO:0005515
Stsc90832g00015 955 SUPERFAMILY Protein kinase-like (PK-like) 673 945 IPR011009 -
Stsc90832g00015 955 ProSiteProfiles Protein kinase domain profile. 672 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90832g00015 955 SMART LRR_typ_2 125 149 IPR003591 -
Stsc90832g00015 955 SMART LRR_typ_2 222 246 IPR003591 -
Stsc90832g00015 955 SMART LRR_typ_2 100 124 IPR003591 -
Stsc90832g00015 955 SMART LRR_typ_2 373 397 IPR003591 -
Stsc90832g00015 955 SMART LRR_typ_2 318 342 IPR003591 -
Stsc90832g00015 955 SMART LRR_typ_2 493 517 IPR003591 -
Stsc90832g00015 955 SMART LRR_typ_2 294 317 IPR003591 -
Stsc90832g00015 955 SMART LRR_typ_2 198 221 IPR003591 -
Stsc90832g00015 955 SMART LRR_typ_2 421 444 IPR003591 -
Stsc90832g00015 955 SUPERFAMILY L domain-like 51 363 - -
Stsc90832g00015 955 ProSitePatterns Protein kinases ATP-binding region signature. 678 701 IPR017441 GO:0005524
Stsc90832g00015 955 FunFam Leucine-rich repeat receptor-like protein kinase PXC2 367 566 - -
Stsc90832g00015 955 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 307 942 - -
Stsc90832g00015 955 Pfam Protein kinase domain 673 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90832g00015 955 FunFam LRR receptor-like serine/threonine-protein kinase 292 366 - -
Stsc90832g00015 955 Pfam Leucine Rich Repeat 225 246 IPR001611 GO:0005515
Stsc90832g00015 955 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 749 950 - -
Stsc90832g00015 955 CDD STKc_IRAK 678 944 - -
Stsc90832g00015 955 FunFam Inactive leucine-rich repeat receptor-like protein kinase 193 289 - -
Stsc90832g00015 955 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 666 748 - -
Stsc90832g00015 955 Gene3D Phosphorylase Kinase; domain 1 661 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90832g00015 Stsc-Chr90832 65545 68796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90832g00015 13 954 Receptor kinase-like Gene Family AT3G56370 61.024 0.0 1109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Stsc90832g00015 Pkinase 7.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90832g00015 - - gmx:100813535 1512.66