Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90832g00010 ATGGGGTGTTTTACTGTATTGAAGGGCAAGAAGAAAAAGCATGATCAAATCGCATATGTAAAGCGTGTGAGCCACAGTGAGCATGTACCTACAGCATTGCCTGAACCTCATACGCGAACGCTCCAGTCGGCTCCTCCTAGTTTTAGGACAAGAGTTAAACCCATTCAACCAATTGGTAAAATGACTTACAATAGAACAAGAGCATTATCTGCTCCATCGACTCTGGATGCAGCGGAACAGGATGCTTTGGATTCGGTTGAGTATGAGGAACAAGAAGAGTCAAGACATCGAGGAGGATCAATGAAGGAGCAGCATTCTTCTAGTCCACAACCTTTACCGCTTCCATCTCCTAAGGGTGGAAGTTCATTGAAGGCTATGGGCAGCTTTAAGTCAGTGACAGCTAATGTTCCTCCAAATTCTTCTGGACCTTTGCCACTTCCACCTACAGGGTCACTTCGAAACTTTCAGTATGATGAAATTGCTGCTGGATTGAAGGAATTCATAAGTGAGGTCAATACTATAGCATCTTTGCAGCATCCGAACCTCTGTAAATTGCTAGGGTTTCATGCACGTGAAGGTACAGAACAGAGAATGTTGGTTTATGAGAGGCTATATCATGGAAGCTTGGACCGCCTGTTGTACGGGAGATCTGATGGCCCGTCTCTTGATTGGAACACACGAATGAAAATCGCTATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCGATGTATAATGAATTTTCGACAGCTAACATACAGATAGACAAAGATTTCAGTGCCAAGCTTTCAGGGTATGGTTGCGTTGGACAACTTCCCGAGGAAGAGATATCGAGCAGTTCATCGGCGGTTGGCAACCTATCAATGGAGACACTGGAAAAAGGAATGCTTACACCAAAAAGCAACGTATGGAGTTTTGGAATTTTTCTTCTAGAGCTTCTCACAGGCAGAAAGAATCTAGATAGCCGTCACCCCAAGGAAGAGAGAAATTTGGTCAAGTGGAGCCGTCCGTTCCTTGCCGACGATTATCGACTTTCATTGATTATGGATCCTCAACTCAAAGGTCGCTTTCCTTCCAAAGCGGCGAGAACAGTAGCTGACATCGCACAAAGATGCCTTCAGAAGGAGCCGTCCGAAAGACCAACCATGAGGACTGTTGTCAAGCACCTCAAAATGATACAGGATTTAAAATACTCTTGCCGGTTCCCGCTTCAAGAACCAGCCACAATCTCCGGAAAACATATGTCAAGATCCCCAAGTCTTAACGGCATCATCAGCCCTGCGCCTAGGCTGAGTTACTCTCCGTCTCCCCCACCAGCAGTGGCCCCACCATCTGTTTCGCCTCCAAGATGGTCCGGGGTCCCATTCCTTCCTCCGCGTGCATGTTCCTCTACCCTCTCCCTGGAGGAGCTCGATAGGCAGGAGAGCCGCAAGTCGTCGTCCTCGGCCTCTAGGAGGGCTAGTGTTGAAGGGTTTTGA 1497 0.4723 MGCFTVLKGKKKKHDQIAYVKRVSHSEHVPTALPEPHTRTLQSAPPSFRTRVKPIQPIGKMTYNRTRALSAPSTLDAAEQDALDSVEYEEQEESRHRGGSMKEQHSSSPQPLPLPSPKGGSSLKAMGSFKSVTANVPPNSSGPLPLPPTGSLRNFQYDEIAAGLKEFISEVNTIASLQHPNLCKLLGFHAREGTEQRMLVYERLYHGSLDRLLYGRSDGPSLDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGQLPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDYRLSLIMDPQLKGRFPSKAARTVADIAQRCLQKEPSERPTMRTVVKHLKMIQDLKYSCRFPLQEPATISGKHMSRSPSLNGIISPAPRLSYSPSPPPAVAPPSVSPPRWSGVPFLPPRACSSTLSLEELDRQESRKSSSSASRRASVEGF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90832g00010 498 MobiDBLite consensus disorder prediction 416 498 - -
Stsc90832g00010 498 Pfam Protein tyrosine and serine/threonine kinase 164 396 IPR001245 GO:0004672|GO:0006468
Stsc90832g00010 498 MobiDBLite consensus disorder prediction 70 125 - -
Stsc90832g00010 498 PANTHER OS01G0588500 PROTEIN-RELATED 159 400 - -
Stsc90832g00010 498 ProSiteProfiles Protein kinase domain profile. 118 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90832g00010 498 Gene3D Transferase(Phosphotransferase) domain 1 204 408 - -
Stsc90832g00010 498 MobiDBLite consensus disorder prediction 417 435 - -
Stsc90832g00010 498 SUPERFAMILY Protein kinase-like (PK-like) 165 422 IPR011009 -
Stsc90832g00010 498 MobiDBLite consensus disorder prediction 437 461 - -
Stsc90832g00010 498 Gene3D Phosphorylase Kinase; domain 1 152 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90832g00010 Stsc-Chr90832 47463 49752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90832g00010 163 400 Receptor kinase-like Gene Family AT4G02010 40.741 1.15e-52 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Stsc90832g00010 PK_Tyr_Ser-Thr 1.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90832g00010 - - gmx:100809117 807.749