Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90832g00004 ATGGTATCAATCAAAGCATCTAATGTAGTCACTCCAAAGGAAGAAACTCCAAAGGGTCTTTTCTGCTTATCAGAGAGTGACCAAATCTGGCGTTGGAGTCATTCGACCACAATCTACGTTTACAATAACAACAACAATGGGAATGTGAATGAGCTTGTTCAAAGAATGAGAGACTCCCTTAGCCACATTCTGGTTCACTACTATCCATTATGTGGACGCTTGAATTGGACAGAAGGTGGCCGTTTGAAAATGGATTGTAACGCAAAGGGAGCCATCCTGCTTCAAGCTGAATCCAAGAAAACAATTGCTGAATATGGAGACTTCTCACCAAATGATGATGCCATCAAAGAACTCATACCAAATCTTGATTACTCTCAACCCATAGAGGACATTCCTTTATTGCTTGCATAG 411 0.4088 MVSIKASNVVTPKEETPKGLFCLSESDQIWRWSHSTTIYVYNNNNNGNVNELVQRMRDSLSHILVHYYPLCGRLNWTEGGRLKMDCNAKGAILLQAESKKTIAEYGDFSPNDDAIKELIPNLDYSQPIEDIPLLLA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90832g00004 136 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 123 - -
Stsc90832g00004 136 Gene3D - 1 136 IPR023213 -
Stsc90832g00004 136 Pfam Transferase family 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90832g00004 Stsc-Chr90832 18433 18843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90832g00004 2 135 Monolignol Biosynthesis Gene Families AT5G48930 33.582 1.05e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90832g00004 K13065 - gmx:100787038 157.532