Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90832g00003 ATGAACGATGGGCTTTCAGCCTTTCACTTCATCAACTCATGGGCCAAACTCACCAGAGGAGAAGCATTGCACCCAAATGAATTGCCATTTCTTCACCGAACGGTTTTCACAGCCTCTAGCCTGCCATCGTTGCGGCGTTTCGACCACCCGGAGTTTAAGCCTCCACCACCCATCCTGGGAAGAATAGACAACATTGAAGAACAAAAGAAGAAGACAAGGTTTGCATTGCTGAAGCTCACAGCAGAACAGGTGCAGGAACTAAAGAAGAATGCAAATACTAATTATTCTGAATCCCAGCAGAAATCTTACAGCAGATTTGAAGCTATTGCAGCGCATATATGGAGATGTGCTTGTATGGCCCGAGAGCTTGACAAAAATCAACCAACCTTAGTGAAGACGATAGTTGATATTCGCAATAAGGTGAATCCTCCTCTACCCAAAACTTATTTTGGGAATGCTTTGGCTTCCACCGTGACACCAACATGTTGCGTTGGAGAAATCATATCAGAGCCGCTGAGTTATGCTGCAAAAAGGATAAGGGAAGCAGTGGAAAGGGCTTCCAATGAAGAGTACATAAGATCACAACTGGAGTCTGTAGCACGACAAGAGCAAATGGATATGATTAGGACTCAGTTATTGGAAAAAGGAGAGTACAGAGCAGATGTGTCCTTCTTTGGAAACCCCAACATTTTGCTTGGAAGTTGGTTGCAGATGCCAATGTATGAAGCAGATTTTGGTTGGGGAAAGCCAGATTATTTTGGTCCTGGTGGTGTGTGTCCCTTCGATAATGGGATGATGGCTCCAAGCCCAGATGGAGATGGCTCCATTGTTATCTTCATGAATTTTCAGATGGCTTACATGCAGAATTTCATCAAGCTCTTTTGGGATAATTTATGA 897 0.4392 MNDGLSAFHFINSWAKLTRGEALHPNELPFLHRTVFTASSLPSLRRFDHPEFKPPPPILGRIDNIEEQKKKTRFALLKLTAEQVQELKKNANTNYSESQQKSYSRFEAIAAHIWRCACMARELDKNQPTLVKTIVDIRNKVNPPLPKTYFGNALASTVTPTCCVGEIISEPLSYAAKRIREAVERASNEEYIRSQLESVARQEQMDMIRTQLLEKGEYRADVSFFGNPNILLGSWLQMPMYEADFGWGKPDYFGPGGVCPFDNGMMAPSPDGDGSIVIFMNFQMAYMQNFIKLFWDNL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90832g00003 298 Gene3D - 1 54 IPR023213 -
Stsc90832g00003 298 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 284 - -
Stsc90832g00003 298 Pfam Transferase family 1 291 - -
Stsc90832g00003 298 Gene3D - 61 297 IPR023213 -
Stsc90832g00003 298 Coils Coil 62 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90832g00003 Stsc-Chr90832 17328 18375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90832g00003 3 296 Monolignol Biosynthesis Gene Families AT5G48930 33.220 4.20e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90832g00003 K13065 - gmx:100779814 335.495