Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90832g00001 ATGTACAAGGGGAGATTTGGAGATTGCAATGGAAATGGTGATCATCATCTTGGATATGTTGAAACTGATCCATCCGGAAGATATGGTCGTTTGAAAGATGTGCTAGGCAAAGGAGCAATGAAAACAGTGTATAGAGCATTTGATGAGTTCTTAGGAATAGAAGTGGCATGGAACCAAGTGTACCTTGGTGATGCATTTCATTCAGCAGAACAACTTCAACGTCTTTACTCAGAGGTTCATCTTCTTAAACACCTCACCCACAAATCAATGATGATCTTCTATGGTTCTTGGATTGATCTCAATTGCAAAACCTTCAACTTCATCACAGAATTGTTCACTTCTGGCACCCTTAGAGAGTATAGGCAGAAGTATAGAAGAGTAGATATGAGAGTATTGAAGAATTGGGCACGCCAGATTCTTAGTGGTTTGGAGTATTTACACGGTAACAATCCACCCGTGATACATAGAGACCTGAAATGTGACAATATATTTGTTAATGGCCATTTGGGGCAGGTCAAAATTGGTGACTTAGGCCTTGCAGCTATACTTCTTAGCTCCAAACATGCTCACAGTGTTATAGGCACACCAGAATTCATGGCACCAGAGTTGTACGAAGAAGAGTACAATGAGCTTGTAGACATATATTCATTTGGGATGTGTATGATTGAGATGCTTACTTTTGATTTCCCATATAGTGAGTGCTCCAACCCTGCTCAAATTTACAAGAAAGTTACTTCGAGACCATCAGCAAAGGAGCTATTGCTTGACCCATTTTTGGCCATAGATGACCCAATTGAATCACCATTAGTGCCAATCACAAAACTACTCACAAATCAAGCTCTGAAGCTTAATTATTCAAATGCAGAAGCTGCAAAGACTGATAGGACAAAGAGCACAGACATGACCATCACTGGCTCAATGAATGAAGTGGACATCAACACAGTCTTTCTTAAAGTGAAGATTTGTGACGCCGACGGGCATACAAGAAACGTGTTCTTTCCATTTGACACAATAAAGGACACAGCTATGGAGGTAGCCATGGAGATGGTAAATGAACTTGAAATCAGCCACTTGGAACCATTGGAGATTGCTGCAATGATAGATCATGAGGTTTCAGCTTTAGTTCCAACTTGGAGAGACCCTAATAGAGGATCTAATAATACTTGTTATCATCATCAACACCACCACCACCAAAGGCAACACAGCTTTAACTATGAAGAAGATGAAGATATCAATAACCATCACCCTTTCTTAACATCATCACCACCGTCGTCGTGTTCTCCTCATGGCTCCATCCACATGTCTTGTTCCTCATACAAGAACCATTTTAATAATAATAATGGGAATAATTGTCCTTTTCTTCAGGATCAATGGCCTCAAGAGGATCCATTATCAATGAATGATGATGCAAGCTCACTAAGCTCAATGAACTCCATGACATGTTCCAATGTTCAATACAGTAGTGACAAATCATCATCATCAGGCAATGAAGAAAATGAGAATAATAACAACAATAATAATGTAGCAGCAACAACAACAGTGATGAAGAAGAGCCATTTTGATCAAGGGCTATTTGAAGAATCTAGTCACACCAATAAACAACTCTGCAACCCAAGAATGGTACTGAACCCTTACAATGATAAAAATTGTTGCATGTGTAATAATAATAATGGTCATGGACTAACGAGGATTCATCAATCTTGCATGGGAGAGAGGAGAAGCCAACAGCTTCAACGTTTGATTATGTTGGAGGAGATGTGCATGTGCAAGTTCAAGAGCCGCATGTTCAACACTATTGGAACCATGGAGAACATTGGGTTTTCTCACCCTCTTAGAGCTCGCAGATGCTTTGATACTCTTTGA 1863 0.3983 MYKGRFGDCNGNGDHHLGYVETDPSGRYGRLKDVLGKGAMKTVYRAFDEFLGIEVAWNQVYLGDAFHSAEQLQRLYSEVHLLKHLTHKSMMIFYGSWIDLNCKTFNFITELFTSGTLREYRQKYRRVDMRVLKNWARQILSGLEYLHGNNPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILLSSKHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTFDFPYSECSNPAQIYKKVTSRPSAKELLLDPFLAIDDPIESPLVPITKLLTNQALKLNYSNAEAAKTDRTKSTDMTITGSMNEVDINTVFLKVKICDADGHTRNVFFPFDTIKDTAMEVAMEMVNELEISHLEPLEIAAMIDHEVSALVPTWRDPNRGSNNTCYHHQHHHHQRQHSFNYEEDEDINNHHPFLTSSPPSSCSPHGSIHMSCSSYKNHFNNNNGNNCPFLQDQWPQEDPLSMNDDASSLSSMNSMTCSNVQYSSDKSSSSGNEENENNNNNNNVAATTTVMKKSHFDQGLFEESSHTNKQLCNPRMVLNPYNDKNCCMCNNNNGHGLTRIHQSCMGERRSQQLQRLIMLEEMCMCKFKSRMFNTIGTMENIGFSHPLRARRCFDTL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90832g00001 620 Gene3D Transferase(Phosphotransferase) domain 1 112 292 - -
Stsc90832g00001 620 ProSiteProfiles Protein kinase domain profile. 29 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90832g00001 620 MobiDBLite consensus disorder prediction 453 507 - -
Stsc90832g00001 620 SMART serkin_6 29 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90832g00001 620 Pfam Protein kinase domain 32 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90832g00001 620 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 538 - -
Stsc90832g00001 620 SUPERFAMILY Protein kinase-like (PK-like) 31 260 IPR011009 -
Stsc90832g00001 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Stsc90832g00001 620 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Stsc90832g00001 620 Gene3D Phosphorylase Kinase; domain 1 14 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90832g00001 Stsc-Chr90832 6981 10596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90832g00001 6 410 MAP Kinase Kinase Kinase AT3G51630 59.862 3.66e-180 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc90832g00001 Pkinase 2.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90832g00001 K08867 - gmx:100272206 701.434