Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90829g00001 ATGCGTTGCTATTCCGGTTTAACCATCCCACCCACCGATCACCGCTTCTGCGTCCCCACCGCACCAAATCCCCTCTCTCTAAGGCCAATTCTTCGCCCAAACCGAGTTACTCTCACCTTCAAGAGCCCCAGGGCCACCCTCAACGGCGCCGCCGCCGCCGAGGAGCTGGCAGCACCGGCGCTTTCGGACCTGAGCTTCTACGAGCTTCTAGGGATTCCGGAATCGGGGTCGCTGATGGAGATAAAGCAAGCGTACAAGCAACTTGCAAGAAAGTATCATCCGGATGTGTGTCCACCGGGTCGGGTCGAAGAGTATACGAAGCGGTTCATTCGGGTCCAAGAGGCTTACGAGACGCTATCGGATCCCACTAGGAGAGCCATGTATGATAGCGACATGGCTAGGGGAGTTCACTTTGCCTTCAATGCTCGTAGAAGTTACCACCACCACGATCAGGTTGAACATAAGAGGGAGTGGAAATCTCGTTGGCAATCACAGCTTTCTGAGCTGAAAAGAAGAAGTAGGAGCAAGAACATGGATGAAGGAGGGAACATGTCATGGGCAGCAAGAATGCGCCAGCAAAGAAATGGATCAGCAGATGAATCATGA 606 0.5347 MRCYSGLTIPPTDHRFCVPTAPNPLSLRPILRPNRVTLTFKSPRATLNGAAAAEELAAPALSDLSFYELLGIPESGSLMEIKQAYKQLARKYHPDVCPPGRVEEYTKRFIRVQEAYETLSDPTRRAMYDSDMARGVHFAFNARRSYHHHDQVEHKREWKSRWQSQLSELKRRSRSKNMDEGGNMSWAARMRQQRNGSADES 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90829g00001 201 CDD DnaJ 66 121 IPR001623 -
Stsc90829g00001 201 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Stsc90829g00001 201 ProSiteProfiles dnaJ domain profile. 65 132 IPR001623 -
Stsc90829g00001 201 Gene3D DnaJ domain 52 179 IPR036869 -
Stsc90829g00001 201 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 56 197 - -
Stsc90829g00001 201 MobiDBLite consensus disorder prediction 168 201 - -
Stsc90829g00001 201 SMART dnaj_3 64 124 IPR001623 -
Stsc90829g00001 201 FunFam Chaperone protein dnaJ 20, chloroplastic 52 160 - -
Stsc90829g00001 201 Pfam DnaJ domain 66 129 IPR001623 -
Stsc90829g00001 201 SUPERFAMILY Chaperone J-domain 62 139 IPR036869 -
Stsc90829g00001 201 PRINTS DnaJ domain signature 104 124 IPR001623 -
Stsc90829g00001 201 PRINTS DnaJ domain signature 67 85 IPR001623 -
Stsc90829g00001 201 PRINTS DnaJ domain signature 85 100 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90829g00001 Stsc-Chr90829 2620 5034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90829g00001 67 130 C2H2 Transcription Factor Family AT1G74250 46.269 3.04e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90829g00001 - - adu:107482289 340.117