Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90828g00012 ATGGAGCCTGTCTCTGCATCCACTTCAGCCACCAAGTCTGCAGAGGAGGCACCTCCAACCACGCAACCTGCTCCACTCCGCAAGATCATGGGGGTGGCCACTATCGCTGCCGGCATACAGTTCGGTTGGGCCCTACAACTCACGCTACTCACACCCTACGTCCAAATGCTCGGAACCCCTCACATGTGGGTTTCCTTCATCTGGCTCTGTGGCCCTATCTCTGGCATTCTCGTCCAGCCTCTCGTCGGCTACCATAGCGACCGCTGCACTTCTGGCTTTGGCCGGCGACGCCCATTCATCGCTGCCGGAACCCTAGCTGTCGCCTTTGCCGGCTTCCTCATCGCCTTCTCCGCCGACATCGGCCACCTCCTCGGCGACGACCTAGTCGCCACCGGAGAGAAGCACAAAATCCGTCCGCGCACCATCGGCGTCTTCATCCTCGGCTTCTGGATCATTGACTTCGCCAACAACATGCTCCAAGGACCGTGTCGTGCCCTCCTCGCCGACCTCGCCGCGGGGAACCAAAGCAAAACGAAAACCGCTTACGCACTCTACACGCTCTTCATGGCCATCGGAAATGTCCTCGGCTCCGCCGCCGGATCCTCCGAAGGCCTTTACAAAATCCTCCCATTCACAACAACAAAAGCATGCCACGACGAGTGCGCGGACGTGAAAACCTGCTTCATGATCTCCGTGCTGCTACTAGTTCTTCTTGTAACTGTTAACTTGATCTACGTGAAGGAAAAACCGTTAACGGTTTCAGTTGAAAAAAGCGAGAAAGGTGGAATGAGGGAGTTATTCGGTGCGTTGCAGGAGCTCAAGAGGCCGATGCGGATTCTTTTATTGGTGACGTGTTTCAATTGGATTGCTTGGTTTCCGTTTTTTGAGTACAACACTGATTGGATGGGAGTTGAAGTGTACGGAGGAAAAGATAAGGATCAGAGTGTGTATGATATGGGGATCCATGAAGGTGCCACCGGGATGATGTTAAATTCTATTGTGTCTGGTGGCGCGTCGTTGGGAATTGGTGTGTTGGCGCGTGGACTTGGTGGTGAGAAGAAGCTTTGGGGAGTTGTTAACTTCTTGTTGGCGGTTTGTTTGGCCATGACGGTGCCTATTTCTAAGATGGCCAAACATTTACGGCGATATGCGGTGGGTGCTGGCGGAGTCTTGGAGCCTCTTCCGCCGCCTCGTGGCGTCAAGTCTGCTGCCTTAACTCTCTACGCGGTTCTTGGAATTCCTCTTGCTATCACTTACTGCATACCCTTTGCTCTAGCATCTATATTTTCCACCGACGCAGGAGCAGGACAAGGGCTATCCCTGGCAGTTCTCAATCTTGCAGTTGTCATACCACAGATGTTGATGTCTGCTGCTAGTGGACCATGGGACAAATTATTTGGTGGCAGTAACCTACCATCTTTTGTGGTGGGTTCCGTGGCGGCTGCAATCAGTGGCATATTGTCCATAACCTTGCTGCCATCTCCGCCACCGGACATCAAGGCTGCAATCACCGGAGGAGGCTTCCATTAA 1530 0.5346 MEPVSASTSATKSAEEAPPTTQPAPLRKIMGVATIAAGIQFGWALQLTLLTPYVQMLGTPHMWVSFIWLCGPISGILVQPLVGYHSDRCTSGFGRRRPFIAAGTLAVAFAGFLIAFSADIGHLLGDDLVATGEKHKIRPRTIGVFILGFWIIDFANNMLQGPCRALLADLAAGNQSKTKTAYALYTLFMAIGNVLGSAAGSSEGLYKILPFTTTKACHDECADVKTCFMISVLLLVLLVTVNLIYVKEKPLTVSVEKSEKGGMRELFGALQELKRPMRILLLVTCFNWIAWFPFFEYNTDWMGVEVYGGKDKDQSVYDMGIHEGATGMMLNSIVSGGASLGIGVLARGLGGEKKLWGVVNFLLAVCLAMTVPISKMAKHLRRYAVGAGGVLEPLPPPRGVKSAALTLYAVLGIPLAITYCIPFALASIFSTDAGAGQGLSLAVLNLAVVIPQMLMSAASGPWDKLFGGSNLPSFVVGSVAAAISGILSITLLPSPPPDIKAAITGGGFH 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90828g00012 509 PANTHER SUGAR TRANSPORTER 25 491 - -
Stsc90828g00012 509 CDD MFS_SLC45_SUC 32 490 - -
Stsc90828g00012 509 MobiDBLite consensus disorder prediction 1 18 - -
Stsc90828g00012 509 MobiDBLite consensus disorder prediction 1 23 - -
Stsc90828g00012 509 NCBIfam sucrose/proton symporter 25 497 IPR005989 GO:0005886|GO:0008515|GO:0015770
Stsc90828g00012 509 Gene3D MFS general substrate transporter like domains 27 260 IPR036259 -
Stsc90828g00012 509 Pfam MFS/sugar transport protein 35 290 - -
Stsc90828g00012 509 SUPERFAMILY MFS general substrate transporter 30 496 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90828g00012 Stsc-Chr90828 69529 72259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90828g00012 1 509 Sucrose Transporter Gene Family AT1G22710 57.225 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90828g00012 K15378 - gmx:547679 649.432