Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90828g00010 | ATGCAGACCTCGTCGCCTGGAAATGTGTCGCAGTTTATAGCCACACAAGGGCCACTGCCTCACACATATGAGGATTTCTGGGAAATGGTTATCCAATATCAATGCCCTGCAATTGTGATGCTTACTAAGTTGGTTGACCATTATAAGGCAATAAAGTGTGGAGATTACTTTCAAGCTGAGGATGGACCTAGAGAATTTGGTAATATCTCTATTATAAGTAAATGGATAAAAACAACTGAAACTTTGCTGGTGTTGCGCCATTTGGAAGTAAATCATAAAGAGGCCGAAGATACACCGTTGTCTGTTTTGCACATTCAGTATCCTGATTGGCCTGACCATGGAGTTCCAAGAGATACATCTTCTGTTCGTGAGATTTTTAGAAGATTGCACCATTTGCCACCAAACCTAGGGCCAATAGTGGTTCACTGCAGTGCAGGCATTGGTAGAACTGGAACATACTGCACAATTCATAACACAATTCAGAGAATACTTGCTGGTGATATGTCTGCTTTAGATATCTCAAGTACAATAGCTATGTTCAGATCCCAACGAATTGGAATGGTTCAGACCCAGGATCAGTTTGTTTTCTGCTATGAAGCTATCATAGATGAACTAGAAGACCTTGTTTCTCTACAGCAGTGA | 642 | 0.4112 | MQTSSPGNVSQFIATQGPLPHTYEDFWEMVIQYQCPAIVMLTKLVDHYKAIKCGDYFQAEDGPREFGNISIISKWIKTTETLLVLRHLEVNHKEAEDTPLSVLHIQYPDWPDHGVPRDTSSVREIFRRLHHLPPNLGPIVVHCSAGIGRTGTYCTIHNTIQRILAGDMSALDISSTIAMFRSQRIGMVQTQDQFVFCYEAIIDELEDLVSLQQ | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90828g00010 | 213 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 123 | 195 | IPR000387 | GO:0016311|GO:0016791 | |
Stsc90828g00010 | 213 | PRINTS | Protein tyrosine phosphatase signature | 100 | 117 | IPR000242 | GO:0004725|GO:0006470 | |
Stsc90828g00010 | 213 | PRINTS | Protein tyrosine phosphatase signature | 12 | 32 | IPR000242 | GO:0004725|GO:0006470 | |
Stsc90828g00010 | 213 | PRINTS | Protein tyrosine phosphatase signature | 138 | 156 | IPR000242 | GO:0004725|GO:0006470 | |
Stsc90828g00010 | 213 | PRINTS | Protein tyrosine phosphatase signature | 187 | 197 | IPR000242 | GO:0004725|GO:0006470 | |
Stsc90828g00010 | 213 | PRINTS | Protein tyrosine phosphatase signature | 171 | 186 | IPR000242 | GO:0004725|GO:0006470 | |
Stsc90828g00010 | 213 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 9 | 206 | - | - | |
Stsc90828g00010 | 213 | SMART | ptp_7 | 101 | 203 | IPR003595 | - | |
Stsc90828g00010 | 213 | Gene3D | Protein tyrosine phosphatase superfamily | 1 | 206 | IPR029021 | - | |
Stsc90828g00010 | 213 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 10 | 205 | IPR029021 | - | |
Stsc90828g00010 | 213 | SMART | PTPc_3 | 1 | 206 | IPR000242 | GO:0004725|GO:0006470 | |
Stsc90828g00010 | 213 | Pfam | Protein-tyrosine phosphatase | 9 | 202 | IPR000242 | GO:0004725|GO:0006470 | |
Stsc90828g00010 | 213 | CDD | PTPc_plant_PTP1 | 1 | 199 | - | - | |
Stsc90828g00010 | 213 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 1 | 204 | IPR000242 | GO:0004725|GO:0006470 | |
Stsc90828g00010 | 213 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 141 | 151 | IPR016130 | GO:0016311|GO:0016791 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90828g00010 | Stsc-Chr90828 | 55938 | 58308 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90828g00010 | 1 | 210 | Protein tyrosine phosphatase (PTP) family | AT1G71860 | 74.286 | 7.31e-125 | 355 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90828g00010 | - | - | pvu:PHAVU_007G087900g | 384.03 |