Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90828g00008 ATGAAACTCCAAAAACAACAACCTTTGTTGCTCTCCCTTGTCACATTCATCTCTATCACCATCTCCACCATTGCCACCACCACCATTATCTCACCGGGCACAATTCTCTATGCTTCAAACACCAACCAATCATGGCCTTCTCCGAACAACACCTTCTCCCTCCGCTTCCACCCTCTCAATACCACCCCACCATCCTTCATCGCTGCTGTCGTACACTCCGGCGGAGCCCCCATTATCTGGTCCGCCGGAAACTCTGCGCCCGTGGACTCCGGCGGGTACCTCCGCCTCCTCCCAGGCGGAAACCTTCGCCTGGTTAACGGCTCCGGCGCCACCATGTGGGACTCTAACACCACCAACATTGGTGTCAACTCAGCAACGGTTCTTGAAAGTGGAAACTTTGTTCTCTCCAATGGAACTTCCCCTGTTTGGTCAAGCTTTGAGAACCCTACTGATACCATTGTCCCTTCTCAAAGTTTCAATCTTGATATGGTTCTGAGATCTGGGGTGTACTCGTTCTCTCTCCAGAAATCTGGGAATCTTAGCCTTAGTTGGAATAATAGTGTTCCATATTGGGATCAAGGCTTCAACTTATCAATGAGTGGTGTGAATTTGAGTTCACCTGTATTAGGGTTGAAATCTGTGGGGATTTTAGAGATAAGTGATCCTAATTTGACTTCACCTGTGGTTGTTGTCTATAGTAGTGACTATAATGAAGGAGGGAACAATGTGTTGAGGGTTTTGAAGCTTGATGATGATGGGAATTTGAGGGTTTATAGTTATTTGAAGGGTAGTGAAGTTGGGACTGTGAGTTGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTATTGTGGGAACTATGGTGTGTGTAGTTACAATGATTTAAATTCAGAACCTCTTTGTAGCTGTCCATCTCAGAATTTTGAGATGGTTGATCCTAATGATGGTAGGAAAGGGTGTCAGAGGAAGGTGAAGCTTGAGGACTGTGTTGGGAAGGTTGCTATGTTGCAATTGGATCATGCAAAATTCTTGACATACCCTCCTGTGTTTGTTGTTAACCCTGAGATATTTTTCATTGGCATTTCAGCTTGTAGTGGAAATTGTCTTGCTGCTAGTTCTTGTTTTGCTTCCACTTCCTTAGCTGATGGAACTGGATGGTGTTACATTAAGACGACGAATTTCATCAGTGGATACCGGAATCCTGCCCTGCCTAGCACTTCCTTCATCAAGGTTTGTCCTCCTGTAGCTCCAAACTCGACGCCCTCTTCGGAGAATGATGTTGTTAAGAAGCATTGGAGGATTCATGGTTGGGTAGTAGCTTTAGTTGTTTTGAGTAGCCTTTTAGGTTTCCTTGCATTTGAGGGTGGTTTATGGTTATGGTGTTGTAGAAACAGCCCGAGATTCGGAGGATTCTCTGCTCATTATGCTCTGCTTGAGTATGCATCCGGTGCACCAATCCATTTCTCCTACAAGGAGCTTCAAAGGTCAACCAAGGGATTCAAGGAGAAGCTAGGTGACGGCGGATTCGGCTCTGTTTATAGAGGAACTCTTGCTAATAAAACTGTTGTTGCTGTGAAGCAACTTGAGGGAATTGAGCAAGGTGACAAACAGTTTAGGATGGAGGTTTCTACCATAAGTAGCACCCATCATTTGAATCTAGTGAGGTTGATTGGTTTCTGTTCCGAAGGGCGCCACCGGCTCTTGGTATACGAGTTCATGAAAAATGGATCACTTGATAAATTCCTCTTTGTTGATGAACTGCAATCAGGGAAATTATTGGATTGGGAGCATAGATTCAACATAGCCCTTGGCGCCGCGAGAGGCATGACATACCTTCACGAGGAGTGTAGAAACTGCATTGTCCATTGTGACATAAAGCCTGAAAACATTCTCTTAGATGAAAACTACAACGCAAAAGTCTCGGATTTTGGCCTTGCAAAGCTCTTGAGTGCCACGAATCAAAGACACAGAACATTGACTAGTGTGAGAGGAACAAGAGGGTACTTAGCGCCGGAATGGCTGGCAAACCTTCCAATTACTTCGAAATCTGATGTGTACAGTTATGGTATGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAGTCTCAGAAGAAACAAACAGAAGAAAGTGTTCAATATGGGCCTATGAGGAGTTTGAGAAAGGTAACATAAGAGGTGTGATTGACAAGAGATTGGTTGGTGAAGAAGTGAAGTTGGAGGAAGTAAAGAGATTGATTATGGCATGTTTTTGGTGCATTCAGGAGCAGCCATCAATGAGGCCAACAATGAGCAAGGTTGTTCAAATGCTAGAAGGTGTGACAGATATTGAAAATCCACCACCACCAAAATCTGCTACACTAGGATTTTCTAGTGCCATTAACACCAATGTTGCAGATTTATCAGCTTCAACATGA 2421 0.4428 MKLQKQQPLLLSLVTFISITISTIATTTIISPGTILYASNTNQSWPSPNNTFSLRFHPLNTTPPSFIAAVVHSGGAPIIWSAGNSAPVDSGGYLRLLPGGNLRLVNGSGATMWDSNTTNIGVNSATVLESGNFVLSNGTSPVWSSFENPTDTIVPSQSFNLDMVLRSGVYSFSLQKSGNLSLSWNNSVPYWDQGFNLSMSGVNLSSPVLGLKSVGILEISDPNLTSPVVVVYSSDYNEGGNNVLRVLKLDDDGNLRVYSYLKGSEVGTVSWVAVEDQCEVFGYCGNYGVCSYNDLNSEPLCSCPSQNFEMVDPNDGRKGCQRKVKLEDCVGKVAMLQLDHAKFLTYPPVFVVNPEIFFIGISACSGNCLAASSCFASTSLADGTGWCYIKTTNFISGYRNPALPSTSFIKVCPPVAPNSTPSSENDVVKKHWRIHGWVVALVVLSSLLGFLAFEGGLWLWCCRNSPRFGGFSAHYALLEYASGAPIHFSYKELQRSTKGFKEKLGDGGFGSVYRGTLANKTVVAVKQLEGIEQGDKQFRMEVSTISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDKFLFVDELQSGKLLDWEHRFNIALGAARGMTYLHEECRNCIVHCDIKPENILLDENYNAKVSDFGLAKLLSATNQRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSEETNRRKCSIWAYEEFEKGNIRGVIDKRLVGEEVKLEEVKRLIMACFWCIQEQPSMRPTMSKVVQMLEGVTDIENPPPPKSATLGFSSAINTNVADLSAST 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90828g00008 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 149 273 - -
Stsc90828g00008 806 FunFam S-receptor-like serine/threonine-protein kinase 472 572 - -
Stsc90828g00008 806 SMART serkin_6 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90828g00008 806 SMART blect_4 36 149 IPR001480 -
Stsc90828g00008 806 Gene3D - 25 147 IPR036426 -
Stsc90828g00008 806 Pfam S-locus glycoprotein domain 236 304 IPR000858 GO:0048544
Stsc90828g00008 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Stsc90828g00008 806 Pfam Protein kinase domain 501 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90828g00008 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 148 - -
Stsc90828g00008 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 194 IPR036426 -
Stsc90828g00008 806 PIRSF SRK 3 805 IPR024171 GO:0004674
Stsc90828g00008 806 Pfam D-mannose binding lectin 78 165 IPR001480 -
Stsc90828g00008 806 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90828g00008 806 ProSiteProfiles EGF-like domain profile. 274 314 IPR000742 -
Stsc90828g00008 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 782 - -
Stsc90828g00008 806 CDD STKc_IRAK 504 774 - -
Stsc90828g00008 806 SUPERFAMILY Protein kinase-like (PK-like) 481 773 IPR011009 -
Stsc90828g00008 806 Gene3D - 148 272 IPR036426 -
Stsc90828g00008 806 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Stsc90828g00008 806 Gene3D Transferase(Phosphotransferase) domain 1 573 781 - -
Stsc90828g00008 806 PANTHER OS07G0415500 PROTEIN 11 784 - -
Stsc90828g00008 806 Gene3D Phosphorylase Kinase; domain 1 472 572 - -
Stsc90828g00008 806 ProSiteProfiles Bulb-type lectin domain profile. 150 270 IPR001480 -
Stsc90828g00008 806 ProSiteProfiles Bulb-type lectin domain profile. 21 148 IPR001480 -
Stsc90828g00008 806 CDD B_lectin 39 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90828g00008 Stsc-Chr90828 51944 54449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90828g00008 474 782 Receptor kinase-like Gene Family AT5G20050 42.857 6.76e-81 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc90828g00008 Pkinase 2.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90828g00008 - - gmx:100810753 1212.21