Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90827g00002 ATGGAAGACTATCAAGTTTGCATCCAACTCTTTCTAATTTGGCTAATCTCCACAATTGTAGTCCGAGCTATTCTCACAAGAAACCGCAACAATGGCGGCCATCATCCTAAAAACCCACCAAGCCCACCGTCACTACCTATCATTGGACACCTTCACTTAGTCTCTTCATTGCCGCATCAAAGCTTTCACAATCTCTCATCCCACTATGGCCCCATCTTTCAAATCTTCCTCGGCTCATTCGCTTGTGTAGTAGTTTCCGCACCCGAAATCGTCAGAGAGTTTCTCAAAACACAAGAATATGCCTTCTCTGATCGCTTCAACATGTTGAGTTCAAAAGATAACATAACTTATGGTTCAAAGGGGATGGTATTCGCCCCTTATGGAAGCCACTGGAAGTTATTGAAGAAGCTTTCCATGTCAGAGCTTTTTGCTGGAAGAACACTAGATCGGTTTCTCCCTTTAAGACGTGAAGAGACTCTGAGGTTCCTCAAAGGCTTGAAGAAGAAAGGGGAAGCTGGAGAAGCTGTTGATATTAGTGGTGAACTCCTTACTCTTACAAATAGCATCATTTCAAGAATGACGATGAGCATAAGGTGTTGTGAAATAGACGGCGACGATCTAGATGATTCAAAAATGATAAGGGAGATGGTGAAAGAGATTATGGAGCTTGCTGGTAAAATGAATAATGTTTCAGAATTTATTTGGTTGTTTAAGAACTGGGACTTGCAAGGGATGAATAAGAGGCTTAAAAAGGTTTTGGAGAGGTTTGATTCCATGTTGGAGAGAATCATAAGTGAGCATGAGTTGGTAAGGAAGGAAAAGGGAGAAGTGAGGGATCTGCTTGATATTTTGCTGGAAATACATGAAGATAATAGGAGAATTGATGGGATTCAATTCACTAAAGAGACTATCAAGGCTTTTATCATGGACATATTCATGGCAGGAACTGATACATCAGCCACAAGCATCGAATGGGCTTTAGCAGCGTTAATTAACAACCCACATGTGATGGAAAAAGTAAGACAAGAAATCGATTCAGTAACTGCAAACAACAGATTAATACAAGAATCAGATGTTGGTAATCTTCCTTATTTACAAGCGATAGTTAAAGAAACACTAAGACTTCATCCTGTTGTTCCACTTTTTAATAGATATTCAACAGAGACATCTATCATTTGTGGCTACGAAATTCCACCAAAGACCGCAGTGTTTATTAATTTGTGGTCCATGGGAAGGGACCCCAAGATTTGGGAGAACCCGCTTGAGTTTAGGCCTGAGAGGTTCCTTGGTGAAGAAAGACAGTTATTAGATTTGAGGGGACAGAATTTTCAATTATTGCCATTTGGAACTGGAAGAAGAAGGTACCCTGGAGCTTCACTAGCACTTCTAACAGTACCTAGTACTCTTGGTGCCTTAATTCAGTGCTTTGAATGGAAGGTTGATGGGAATGTTAGTATGGAAGAGAAACCTGGCAGTGGCCTCACACTTTGTAGGGCTCATCCTTTAACATGTGTTCCTGTGCCTCGTTTTGGTCAATTGAGCTACCTCGGAGAAAACTAG 1560 0.4103 MEDYQVCIQLFLIWLISTIVVRAILTRNRNNGGHHPKNPPSPPSLPIIGHLHLVSSLPHQSFHNLSSHYGPIFQIFLGSFACVVVSAPEIVREFLKTQEYAFSDRFNMLSSKDNITYGSKGMVFAPYGSHWKLLKKLSMSELFAGRTLDRFLPLRREETLRFLKGLKKKGEAGEAVDISGELLTLTNSIISRMTMSIRCCEIDGDDLDDSKMIREMVKEIMELAGKMNNVSEFIWLFKNWDLQGMNKRLKKVLERFDSMLERIISEHELVRKEKGEVRDLLDILLEIHEDNRRIDGIQFTKETIKAFIMDIFMAGTDTSATSIEWALAALINNPHVMEKVRQEIDSVTANNRLIQESDVGNLPYLQAIVKETLRLHPVVPLFNRYSTETSIICGYEIPPKTAVFINLWSMGRDPKIWENPLEFRPERFLGEERQLLDLRGQNFQLLPFGTGRRRYPGASLALLTVPSTLGALIQCFEWKVDGNVSMEEKPGSGLTLCRAHPLTCVPVPRFGQLSYLGEN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90827g00002 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 502 - -
Stsc90827g00002 519 SUPERFAMILY Cytochrome P450 39 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 CDD CYP93 70 506 - -
Stsc90827g00002 519 Gene3D Cytochrome P450 23 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 FunFam Cytochrome P450 family protein 30 504 - -
Stsc90827g00002 519 Pfam Cytochrome P450 39 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 Coils Coil 337 357 - -
Stsc90827g00002 519 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90827g00002 519 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90827g00002 Stsc-Chr90827 2500 6757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90827g00002 1 515 Cytochrome P450 AT5G06900 45.243 1.06e-152 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90827g00002 K24188 - gmx:100805931 612.453