Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90826g00005 ATGAAGATCGAGGAATTGGATGACACGGGGAGTAGTTGGGATGAAGAGAAGGGGAATATGCAGATTGTGAGGGTTGATTCAAAGAGAGCGTTGGTTGGAGCATTTGCGCGGGTCCTCTTTTACCCGACACTCTTGTATAATGTGCTTCGCAACAAGATTGAAACTGAGTTCAGGTGGTGGGATCAAGTTGATGAGTTTTTGTTGCTGGGCGCAGTCCCATTCCCCAAAGATGTTCCTCGCTTGAAGCAGCTTGGCGTTGGCGCTGTAATTACTCTTAATGAACCTTATGAAACTTTGGTGCCCTCATCCTTGTATCATGCTCATGGAATTGATCATTTGGTAATTCCCACAAGGGATTATCTCTTTGCCCCCTCGTGTGCAGATATCAGCCGGGCTGTGCAGTTTATTCACCAGAATGTAATTTGTGGTAAAACTACTTATGTTCACTGTAAAGCTGGCCGGGGGAGGAGTACAACAATTGTGCTTTGCTATCTGATTGAATACAAGCACATGACACCAGCTGCTGCCTTGGAATATGTGCGGTCTCAGAGACCCAGAGTTCTGCTAGCACCATCGCAATGGAAGGCTGTTCAAAACTATAGCAAGCACAGACCTTGTTCTTTAGCACGCTCACCCTCATGGGATGCAGTTCTTATAACAAAAGCTGATCTTGAAGGCTATCAAAGCACTGGTAATGCTGGTATGGAGCTGGCTATTGCTTCTAAAGCACCAAAGACTAATCCCATGATATCAAGACTGTCTTGCCTGTTTGCATCCTTAAAGGCATCTGGAAATAGTGTACCCATGACAAGGTGGTTGCCGGTTTCTGAGTCACGTGCTTGCTAA 846 0.4586 MKIEELDDTGSSWDEEKGNMQIVRVDSKRALVGAFARVLFYPTLLYNVLRNKIETEFRWWDQVDEFLLLGAVPFPKDVPRLKQLGVGAVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSCADISRAVQFIHQNVICGKTTYVHCKAGRGRSTTIVLCYLIEYKHMTPAAALEYVRSQRPRVLLAPSQWKAVQNYSKHRPCSLARSPSWDAVLITKADLEGYQSTGNAGMELAIASKAPKTNPMISRLSCLFASLKASGNSVPMTRWLPVSESRAC 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90826g00005 281 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 202 IPR029021 -
Stsc90826g00005 281 FunFam Dual specificity phosphatase domain protein 59 206 - -
Stsc90826g00005 281 CDD PTPMT1 59 203 IPR044596 GO:0004721
Stsc90826g00005 281 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 258 - -
Stsc90826g00005 281 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Stsc90826g00005 281 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Stsc90826g00005 281 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Stsc90826g00005 281 Pfam Dual specificity phosphatase, catalytic domain 79 201 IPR000340 GO:0008138|GO:0016311
Stsc90826g00005 281 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Stsc90826g00005 281 Gene3D Protein tyrosine phosphatase superfamily 59 205 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90826g00005 Stsc-Chr90826 24469 27066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90826g00005 4 269 Protein tyrosine phosphatase (PTP) family AT2G35680 50.482 2.85e-95 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90826g00005 - - gmx:100817410 474.937