Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90826g00004 ATGTTGCCCAACAACACCTGTCTTCTCACTTTCCTTCTCCTCCTCCTCCTCACTACCATCCATTTAACCGCACCCACTAGTGTCTCCGTTGGTGTTGGTGTTGGTGTTGGTGTTGGAGTGGGAGTTGCCATTGGCAATGGCAATGGTGGTGGTGACAACACCCCACCTTCAGAGCCTCCCTCATCAAAGTTGGAGACTGCCTACAAAGCTCTGCAGGCATGGAAATCAGCCATCACCGATGATCCTCTCAAGCTTCTAGATACATGGGTTGGTCCTAATGTATGCTCCTACAAAGGAGTCTTCTGTTCACCTCCTCAAGACGATGAAATCTCTTCTCTTTCAACATCTACTGCCACCGCCACCGTTGTAGTTGCAGGAATCGACCTCAACCATGCAAATCTCCAAGGAACTCTCGTCAAAGAACTCTCTTTACTCATCGACATGTCTCTTCTTCACCTCAACACTAACAGATTCACCGGCACAGTTCCTGACACATTCAAAGACCTTGTTTCTCTAGAAGAACTGGACCTCAGCAACAACCAACTCTCTGGTCCATTCCCCATTGTTACTCTCTACATGCCAAGCCTCCTCTACTTGGACCTCAGATTCAACTCATTCTCAGGTCAACTCCCTGATGTACTCTTCAACAGGAAGCTGGATGCCATATTCCTCAACAACAACAATTTCCAAGGTGAGATCCCTGAGAGCATGGGGAATTCACCTGCATCCGTGATCAATCTGGCTAACAACAAGCTCAGTGGGAACATTCCATCAAGTTTTGGGATCATGGGGAATAAGCTCAAAGAGGTTCTGCTCCTCAACAACCAGCTAACAGGTTGCATCCCTGAAGGGGTGGGTCTGTTTGATGAGCTTGAAGTGTTTGATGTGAGCTTCAATTCACTGATGGGGCATGTTCCAGACACAATATCATGCTTGCAAGACATTGAGGTTCTGAATTTGGGACACAACAAGCTCTCAGGAGACTTATCTGATGTGGTATGCTCCTTGACAAGTTTGGTGAACCTCACCGTTGCTTACAACTTTTTCTCTGGTTTTAGCCAGCAATGCAGCAGGCTTTTCAACATTGGCTTTGATTTCTCAGGGAACTGCATTCCTGGTAGGGACATGCAGAGACCTCAACCAGAGTGCTCTGTCATTCCAGGTGGCACCCTCAATTGCTTTAGAATCCCTACTCCAAGGCCTCTTGTTTGTGCTTCTTTGCCTGAAATCATCTTCTCTAATAATATGCAATCATCCTCACACCATACTTCTTCTTCTTCTTCCTCAAATCCTTGA 1296 0.4668 MLPNNTCLLTFLLLLLLTTIHLTAPTSVSVGVGVGVGVGVGVAIGNGNGGGDNTPPSEPPSSKLETAYKALQAWKSAITDDPLKLLDTWVGPNVCSYKGVFCSPPQDDEISSLSTSTATATVVVAGIDLNHANLQGTLVKELSLLIDMSLLHLNTNRFTGTVPDTFKDLVSLEELDLSNNQLSGPFPIVTLYMPSLLYLDLRFNSFSGQLPDVLFNRKLDAIFLNNNNFQGEIPESMGNSPASVINLANNKLSGNIPSSFGIMGNKLKEVLLLNNQLTGCIPEGVGLFDELEVFDVSFNSLMGHVPDTISCLQDIEVLNLGHNKLSGDLSDVVCSLTSLVNLTVAYNFFSGFSQQCSRLFNIGFDFSGNCIPGRDMQRPQPECSVIPGGTLNCFRIPTPRPLVCASLPEIIFSNNMQSSSHHTSSSSSSNP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90826g00004 431 Gene3D Ribonuclease Inhibitor 244 430 IPR032675 -
Stsc90826g00004 431 Pfam Leucine rich repeat 151 205 IPR001611 GO:0005515
Stsc90826g00004 431 PRINTS Leucine-rich repeat signature 312 325 - -
Stsc90826g00004 431 PRINTS Leucine-rich repeat signature 172 185 - -
Stsc90826g00004 431 Pfam Leucine rich repeat N-terminal domain 67 103 IPR013210 -
Stsc90826g00004 431 Gene3D Ribonuclease Inhibitor 65 243 IPR032675 -
Stsc90826g00004 431 ProSiteProfiles Leucine-rich repeat profile. 171 192 IPR001611 GO:0005515
Stsc90826g00004 431 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 53 422 - -
Stsc90826g00004 431 FunFam Leucine-rich repeat extensin-like protein 1 68 239 - -
Stsc90826g00004 431 SUPERFAMILY L domain-like 69 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90826g00004 Stsc-Chr90826 19940 21235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90826g00004 56 393 Leucine-rich Repeat extension Gene Families AT3G22800 48.094 4.00e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90826g00004 - - gmx:100820611 575.089