Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90826g00001 ATGTCGTGGCAGGCCTACGTCGATGAGCACCTTCTCTGCGACATCGAGGGTAATCAGCTCACCTCTGCCGCTATCCTCGGCCACGACGGCAGTCTTTGGGCTCAGAGCTCCAATTTCCCTCAGTTTAAGCCTGAGGAAATCACTGCTATCATGAATGATTTTGCGGAGCCTGGATCACTTGCTCCCACTGGACTTTACCTCGGTGGCACAAAATATATGGTAATCCAAGGTGAGCCCGGAGCTGTCATCCGAGGGAAGAAGGGTCCTGGTGGTGTTACTGTTAAGAAGACCAATATGGCATTGATCATTGGCATCTATGATGAACCAATGACCCCGGGTCAGTGCAACATGGTTGTTGAGAGGCTCGGTGACTATCTCATTGAGCAGAATTTCTAA 396 0.5051 MSWQAYVDEHLLCDIEGNQLTSAAILGHDGSLWAQSSNFPQFKPEEITAIMNDFAEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALIIGIYDEPMTPGQCNMVVERLGDYLIEQNF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90826g00001 131 SUPERFAMILY Profilin (actin-binding protein) 2 131 IPR036140 -
Stsc90826g00001 131 FunFam Profilin 1 131 - -
Stsc90826g00001 131 PANTHER PROFILIN 1 131 IPR005455 GO:0003779
Stsc90826g00001 131 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Stsc90826g00001 131 CDD PROF 2 131 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Profilin signature 100 113 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Profilin signature 113 130 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Stsc90826g00001 131 Gene3D Dynein light chain 2a, cytoplasmic 2 130 - -
Stsc90826g00001 131 Pfam Profilin 1 130 IPR005455 GO:0003779
Stsc90826g00001 131 SMART prof_2 1 131 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Plant profilin signature 104 117 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Plant profilin signature 84 99 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Plant profilin signature 117 130 IPR005455 GO:0003779
Stsc90826g00001 131 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90826g00001 Stsc-Chr90826 4445 6169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90826g00001 1 131 Cytoskeleton Gene Families AT2G19760 76.336 2.04e-75 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90826g00001 K05759 - rvl:131325938 251.906