Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90824g00006 ATGGAGCTTCTTCAAATAGCTTACTTCCTTCTCTTTCTTGCAACTCTTACTTGGCTCTTATCCACAACATTCTCTTCATCTTCAACATCCAAAAAGGCTCCACCAAACACCAATGTTCCCAAAGTCTACCCTATAATTGGCTCCATATTCTCCATCGCCGCCAACAAACACCGCCGCATCCACTGGATCTCCGACATCCTCCTCTCCTCCCCATCCTCCTCCACCTTCACTCTCCGCCGCTCCCTGGGCTCCCGCCAGATCTTCACCGCCGACCCCGCCGTCGTTCACCACATCCTCAAGTCCAATTTCCCAACTTACCACAAAGGTCCCACCCTCCACCGCGCCCTAGGGGACTTCCTCGGCGACGGAATCTTCAACTCCGACGGCAGCAACTGGAAGTTCCAGCGCCAGCTCTCTAGCCACGAGTTCAACACAAGATCCCTCCGCAACTTCGTTGAAACTGTCGTAGACGCTGAACTCTCCAACCGCCTCATCCCAATCCTATCACAGAGATGTGAAACCGCCATAACCGCCACATGTTCTTGCGACTTACAAGATATTCTCCAGCGCTTCGCCTTCGATAACATTTGCAAGATCGCTTTCGGTTACGATCCGCAATATCTCCTCCCGTCGCTTCCAACAACCACCTTCGCCAAGGCCTTCGACGACGCCACAAGAATCAGCAGCGAGAGGTTCAATTGCGCGGTGCCATTAGTATGGAAGATAAAGAAAATCCTGAACATAGGTTCCGAAAAGAGGCTCCGAACTGCGGTGTCGGAGGTGAGAGTTCTAGCGAAGAAGATCGTAGATGAGAAGAAGCGAGAGCTTGAAGAGAAGAAAACGCTGCAATCCGTGGATCTGTTGTCGCGGTTCTTGGTTTCTGGACAAAACGACGAGTCGTTTGTAACTGACATAGTCATCAGCTTTATTCTAGCGGGGAGAGACACTACTTCTGCCGCGCTCACGTGGTTCTTCTCGCTACTCGCCAATCATCCGCGCGTGGAAGAGGAGGTGGTTGGCGAAGTTAACCAGAAGAACCACGCGGATGGTTCGTCAGTTTACGATGAATTAAAGGATATGGTGTATACTCACGCCGCATTGTGCGAGAGCATGAGATTATATCCTCCTGTGCCTGTGGATACGAAAGAGGCTGCAAACGACGACGTTCTGCCAGACGGTACTTTTGTCAAGAAAGGGACTCGTGTGGCGTACCATATCTTTGCGATGGGGAGGAGTGAGAAGATATGGGGCCCGGATTGGGCCGAGTTCAGGCCCGAAAGGTGGTTGAGGCGGGATGGGGAGGGGAAGTGGGCTTTTGTTGGAGTTGATCCGTACAGTTATACGGTGTTTCAGGCTGGGCCTAGGGTGTGTTTGGGGAAGGAGATGGCGTTTTTGCAGATGAAGAGAATTGTGGCGGGGATCTTGAAGGAGTTTAGGGTGGTTCCGGCGGTGGCGGAAGGGGTGGTGCCGGAGTATACTGGATACCTTACGTCGCTAATGAAAGATCATCTTTGTAAGGGGAAAACTTTTATGTTGAGAGTGGGATTTGAACCCACGCCCTTTCGGACCAGAACCTTAATCTGGCGCCTTAGACCAACTCGGCCATCTCAACGCTTTGATGTAAATCCTTAA 1632 0.5165 MELLQIAYFLLFLATLTWLLSTTFSSSSTSKKAPPNTNVPKVYPIIGSIFSIAANKHRRIHWISDILLSSPSSSTFTLRRSLGSRQIFTADPAVVHHILKSNFPTYHKGPTLHRALGDFLGDGIFNSDGSNWKFQRQLSSHEFNTRSLRNFVETVVDAELSNRLIPILSQRCETAITATCSCDLQDILQRFAFDNICKIAFGYDPQYLLPSLPTTTFAKAFDDATRISSERFNCAVPLVWKIKKILNIGSEKRLRTAVSEVRVLAKKIVDEKKRELEEKKTLQSVDLLSRFLVSGQNDESFVTDIVISFILAGRDTTSAALTWFFSLLANHPRVEEEVVGEVNQKNHADGSSVYDELKDMVYTHAALCESMRLYPPVPVDTKEAANDDVLPDGTFVKKGTRVAYHIFAMGRSEKIWGPDWAEFRPERWLRRDGEGKWAFVGVDPYSYTVFQAGPRVCLGKEMAFLQMKRIVAGILKEFRVVPAVAEGVVPEYTGYLTSLMKDHLCKGKTFMLRVGFEPTPFRTRTLIWRLRPTRPSQRFDVNP 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90824g00006 543 SUPERFAMILY Cytochrome P450 40 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 Pfam Cytochrome P450 83 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 CDD CYP86A 75 504 - -
Stsc90824g00006 543 PANTHER CYTOCHROME P450 24 500 - -
Stsc90824g00006 543 Gene3D Cytochrome P450 27 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90824g00006 543 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90824g00006 Stsc-Chr90824 17433 20145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90824g00006 9 501 Cytochrome P450 AT3G48520 47.000 3.24e-140 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90824g00006 K20769 K20768 gmx:100781020 650.973