Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90824g00002 ATGCTGTTCCCTGAGATTGAGGCTATGCCTGGGCTCAACGAACAGCATCAGATAGATTGCATCGGATATGTAGTTGCAAAGGAAGACCCCAAAAACATGGTCACCAAAGCTGGCCAGGCCACTACATGCATGACCCTGTATCTGGAGGATCTAGAGAAAAATAAGATGAAGTGCACAGTATTTAGGGATATGGTTGGGGAATTAGCTCAGCTAGCTGCCAGGGATGATGTTCAGCCTCTGATTGTGGTTGCCCAACTGTTCAAATCAAGTGTGTATCTAAATGAAACCCATATCCAAAACACCCGTTACATGTCCCAGGTCTTCCTGAATCCTGACTTTCCAGAAGTAGCTGCATTCAGAAAAAGCTTGTTGGCACTGGGTGAATCTGCCACCCAAGGTATTACACATGTTGAGTCTCAGCCGCAGTATTCGGCTGAAAATGAGTTGGAGGGCGGTGCCCGTGCAATCACCACTATCGAGGATGTTATGAACCAAACAGATGAAACTTCCTGCTGGATTCTTGCAGAGATTGTATCTGTTGAGGGGGGGCCCAACGGTTGGTGTTATCTGTCGTGTTTCAATTGTGTGAAGAAAGTGGTGGAGGTCAAGAATGGCTATCAGTGCCCCAAATGTAAAAGAATTATTGTGGATCCAACTCTGAGGTTTCGTCTTCATGCCATAATTATTGGTCAAACCGCCAAGGAAATTATAGATTCAGAAAAAGGGAAGCATGATAATTCACAGCCCAAGGTCATTCAATCACTTCTTGAGAAGAAGTTCCTGTTTAAGGTTGCAGTCTCCGCTCAGAATGTGATTTCCATGGACTATATGTATGCTGTTGAGAGGATATGTGATGATGAGGCACTGATTGGAGTATACTCTTCAGCAAATTCTATGGAAATCGGAGGTATGCACCAAAGTGCATCAAACATGCTACCTATCATAGCATCTGCTGAAGCTGATTCACAAGCTTCTGGTCCTGGAATTGTGTCTCTATCCAAGGACACTAATTCACAGGGGGCTTTTGAGGATGGTGGTGGAAGCCCTGAGATAGCCGTTGGTGAGGACATCATTCCAAGTGGGGGTCTCAGTGGGTTGGCAAGTCCTGAGATATCCCATTCATGTACCAGATCAGGCCGCCGTGTAGTTTTGAAGAGGAAGTTTGATTAG 1170 0.4547 MLFPEIEAMPGLNEQHQIDCIGYVVAKEDPKNMVTKAGQATTCMTLYLEDLEKNKMKCTVFRDMVGELAQLAARDDVQPLIVVAQLFKSSVYLNETHIQNTRYMSQVFLNPDFPEVAAFRKSLLALGESATQGITHVESQPQYSAENELEGGARAITTIEDVMNQTDETSCWILAEIVSVEGGPNGWCYLSCFNCVKKVVEVKNGYQCPKCKRIIVDPTLRFRLHAIIIGQTAKEIIDSEKGKHDNSQPKVIQSLLEKKFLFKVAVSAQNVISMDYMYAVERICDDEALIGVYSSANSMEIGGMHQSASNMLPIIASAEADSQASGPGIVSLSKDTNSQGAFEDGGGSPEIAVGEDIIPSGGLSGLASPEISHSCTRSGRRVVLKRKFD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90824g00002 389 MobiDBLite consensus disorder prediction 326 348 - -
Stsc90824g00002 389 Gene3D - 2 132 IPR012340 -
Stsc90824g00002 389 SUPERFAMILY Nucleic acid-binding proteins 157 276 IPR012340 -
Stsc90824g00002 389 MobiDBLite consensus disorder prediction 326 343 - -
Stsc90824g00002 389 Gene3D - 141 228 IPR012340 -
Stsc90824g00002 389 SUPERFAMILY Nucleic acid-binding proteins 6 123 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90824g00002 Stsc-Chr90824 4340 6333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90824g00002 18 232 Core DNA Replication Machinery Family AT4G19130 24.348 8.59e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90824g00002 - - ahf:112718168 338.191