Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90821g00002 ATGGGCAGTTGCAGCATCTACCTTCCCCTTATCATTGCTACATCGTTTCTTCTTCTTCTTCTGGCATTCTTGCCGGATGTTGTTCATGGCAGCGCCACCACCAAAAAGTGCTACATTGTGTACTTGGGAGCACATTCTCATGGTCCAAGTCCTACCTCTCTTGACCTTGATGCCGCCACAAATTCTCACTACCATTTACTAGCTTCAGTTTTGGGAAGCCATGAGAAAGCGAAAGAGGCAATTATATACTCGTATAATAAACACATAAATGGCTTTGCTGCCCTGCTTCAAGAGGAAGAAGCAGCACATATTGCAAAAAAAGCAAATGTGGTGTCTGTATTCTTGACGAAAGAGCACAAATTGCACACAACCCGGTCTTGGGAATTTCTTGGACTAAACCGAAATGATGGCAACTCGGCATGGAGAAAGGGACGCTTTGGTGAAAATACAATCATTGCTAACATTGACACAGGAGTTTGGCCAGAATTGAGGAGTTTCAGTGACAGCGGGTATGGCCCCGTCCCTTCAAAATGGCGCGGGGGCAACGTTTGTCAAATACCCAACAACAACAAAACCCGCCCTTGCAACAGAAAGTTAATAGCAGCAAGATTTTACAACAGCGCCTTCGAGATCTACAACGGCAAGCTAAACCCATTGCTACGCACTGCACGTGACTTTGTGGGCCATGGCACCCACACTCTCTCAACCGCTGGCGGCAATTTTGTGTCAGGCGCCAACGTATTTGGAGTTGGGAATGGAACCGCCAAAGGTGGGTCCCCAAGAGCCAGAGTTGCATCCTACAAAGTTTGTTGGTCCCTAACTGACCCAGCCAGTTGCTATGGAGCCGATGTGCTGGCCGCAATAGACCAAGCCATAAGCGACGGTGTTGACATCATCTCACTCTCTGCCGGTGGCCAGTACTTACACCACCCTGAAGATATCTTCACTGATGAAGTCTCCATTGGTGCATTTCATGCAGTTTCTAGAAACATTCTGTTTGTTGCGTCTGCAGGGAATGATGGACCCACACCAGGAACCGTTGTGAATGTAGCTCCTTGGGTATTCACAATTGCTGCTAGCACCATTGATAGGGACTTCACCAGTACCATCACTCTTTCTAACGGTCAACAAATCACGGGTGCGAGTCTTTTCTCAAACTTGCCACAAAACCAGGGATTTTCTGTGATTGATTCTACTGCTGGTAAATTTGCCAATGCGTCAAACCGAGATGCTCAACTTTGTAGGCCAGGAACACTTGATCCAGCGAAAGTAACAGGGAAGATAGTGTCATGTTTTAGAGAAGGTAAAATAAAATCAGTGGCAGAAGGTCAAGAAGCTAAGAATGCAGGTGCAGTGGGAATGTTCCTGCGCAATCAACAGCAAAATGGGAATACTCTTCTTGCTGAGCCTCACGTTTTATCTACTGTTGGCGGTTCCAGTGGTCATTACATTGTCAAACCTCATCTAATAACAACAAAAGATCCTACTTATTTGACCACTTCCACAGCTCTTGCAACGGGCTCGTCTAATGATACAGTAAGAGTAAGATTCTCGTCAGCAAGAACAGTATATGGAATAAAGCCAGCTCCAGTTATGGCTTCCTTCTCCTCAAGAGGACCCAATAAGATTCAACCATCAATACTCAAGCCGGATGTGACTGCACCTGGAGTTAACATACTTGCTTCATATTCATTATTCGCAAGTGCATCTGATCTCCTTTCTGACAACCGTCGTGGCTTTAAATTTAATGTGCTGCAAGGAACTTCCATGTCTTCTCCTCATGTCGCTGGTATAGCTGGCCTTCTCAAAACTCTGCATCCTACTTGGAGTCCAGCAGCCATCAAATCTGCCATCATGACTACTGCTACCACAGTGGACAACACAAAGAAGCCTATTCGAGATGCATTTGATAAAAAGCTAGCGACTCCCTTTGATTATGGTTCAGGACATGTTCAACCTAATCTTGCAATAGAGCCTGGTCTTGTTTATGATCTGCACCTTAGTGATTATTTGAACTTCTTATGTGCCTCTGGATACAACCAACAACTCATTTCGGCACTTAACTTCAACAGGACTTTCACTTGTAAAGGAACTCACAGCATAGATGACTTAAACTACCCTTCAATCACATTGCCAAATCTAAAGTTGAGTTCAGTGACAGTTACTCGCACACTCACCAACGTTGGTCCCCCAGGCACATATAATGCAACTGCCAAATTAGATGGATGCAGAATTACTATTGTGCCCAACTCCTTAACATTCACAAAGATTTATGAGAAGAAGACATTTCGAGTTACTATACAGGCTTCAAGTGTAGTTAAACTTTATAAATATCAATTTGGGGAATTGTTGTGGACAGATGGAAAACACAGGGTTAGGAGTCCCATTACAGTCCAACGTCGAAGGTGA 2409 0.4467 MGSCSIYLPLIIATSFLLLLLAFLPDVVHGSATTKKCYIVYLGAHSHGPSPTSLDLDAATNSHYHLLASVLGSHEKAKEAIIYSYNKHINGFAALLQEEEAAHIAKKANVVSVFLTKEHKLHTTRSWEFLGLNRNDGNSAWRKGRFGENTIIANIDTGVWPELRSFSDSGYGPVPSKWRGGNVCQIPNNNKTRPCNRKLIAARFYNSAFEIYNGKLNPLLRTARDFVGHGTHTLSTAGGNFVSGANVFGVGNGTAKGGSPRARVASYKVCWSLTDPASCYGADVLAAIDQAISDGVDIISLSAGGQYLHHPEDIFTDEVSIGAFHAVSRNILFVASAGNDGPTPGTVVNVAPWVFTIAASTIDRDFTSTITLSNGQQITGASLFSNLPQNQGFSVIDSTAGKFANASNRDAQLCRPGTLDPAKVTGKIVSCFREGKIKSVAEGQEAKNAGAVGMFLRNQQQNGNTLLAEPHVLSTVGGSSGHYIVKPHLITTKDPTYLTTSTALATGSSNDTVRVRFSSARTVYGIKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILASYSLFASASDLLSDNRRGFKFNVLQGTSMSSPHVAGIAGLLKTLHPTWSPAAIKSAIMTTATTVDNTKKPIRDAFDKKLATPFDYGSGHVQPNLAIEPGLVYDLHLSDYLNFLCASGYNQQLISALNFNRTFTCKGTHSIDDLNYPSITLPNLKLSSVTVTRTLTNVGPPGTYNATAKLDGCRITIVPNSLTFTKIYEKKTFRVTIQASSVVKLYKYQFGELLWTDGKHRVRSPITVQRRR 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90821g00002 802 ProSiteProfiles Serine proteases, subtilase domain profile. 126 657 - -
Stsc90821g00002 802 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 798 IPR045051 -
Stsc90821g00002 802 ProSitePatterns Serine proteases, subtilase family, serine active site. 587 597 IPR023828 -
Stsc90821g00002 802 Pfam Subtilase family 147 625 IPR000209 GO:0006508|GO:0008236
Stsc90821g00002 802 Gene3D - 674 801 - -
Stsc90821g00002 802 FunFam Subtilisin-like protease SBT5.3 27 122 - -
Stsc90821g00002 802 FunFam Subtilisin-like protease SBT1.5 149 381 - -
Stsc90821g00002 802 Pfam Peptidase inhibitor I9 38 121 IPR010259 -
Stsc90821g00002 802 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 122 IPR037045 -
Stsc90821g00002 802 Gene3D - 363 524 - -
Stsc90821g00002 802 Pfam Fibronectin type-III domain 703 798 IPR041469 -
Stsc90821g00002 802 Gene3D Peptidase S8/S53 domain 150 670 IPR036852 GO:0004252|GO:0006508
Stsc90821g00002 802 CDD Peptidases_S8_3 119 623 IPR034197 -
Stsc90821g00002 802 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Stsc90821g00002 802 PRINTS Subtilisin serine protease family (S8) signature 586 602 IPR015500 -
Stsc90821g00002 802 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Stsc90821g00002 802 SUPERFAMILY Subtilisin-like 121 661 IPR036852 GO:0004252|GO:0006508
Stsc90821g00002 802 CDD PA_subtilisin_like 369 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90821g00002 Stsc-Chr90821 1073 6398 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90821g00002 35 799 Subtilisin-like Serine Gene Family AT5G59810 52.523 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90821g00002 - - gmx:100813564 1148.27