Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90820g00002 ATGCAAAGTATGATCAAAAGCAAGAAGCACGTTGCAAGACCTAATTCGCTGTTACTGAAAGATTACCTGATGAGGGATGACCTGAGCTCCTGCTCATCCAACGGTTTCAAATCGTTCCCGCGCCGACAATGCTGCAGCACCGCCGTTGGATTCCTTGTGGCGGAGAAAGATCTCAAACGCTGTAACAGGAGGAGGAGGAGGTCCAGGAGGAACAGCACTACAACTACTACCACTCTACTCTTAGCTCCTCGTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCGTCCTCGGTTCTGCAGAGAGCTTCGGAAGCTGTAATCAAGGCCATCAAGTCACTTCCACACAAGAGTAGTGGCAGATCCAAGAAAGACGGTTCTGGTAGCGTTTTTTCTAGAAGCTTCTCGAGGAAGCTCCTGAGTAGAAGCTTCTGGAGGAAAGCGGAAGTAGCGAAGGAAGAGGAAGGAACTGGAAGCACGCAGAGATGGATAAGGACTTCATTCCGCGAGTTGCTTATGCAGGATAGCCACAAAACGGCGTCGTTGAACGAGGATACCGCGTTCACTTCAAATGCCGCAACCACCACCACCACCACCACTACCTGCTCCTCCTCCTCTTCTTCTTCTTCTTCAGGTTGTGGCAGTAACAGTAGCTGGGGAGAGAGTGAGTTCACATTTTCGTCTTCAAGTGCTGCTTCTTCTTCTTCTATCGGTTCCGGCGAAAACGACGTCGCTCAGGTCACAAAAGACCCGCCTCCGCCCACTGGCAAGATACATCATGAGACAACAAGGGATTGGCCAAATGAGGAGAAAGAACAATTAAGTCCAGTATCAGTACTAGATTGTCCGTTTGAAGATGATAATGAAGGAACCGAACAGAAGCGCATGCAGCAGAAGAGACGGCACTTTAAAGCCATGGCTTCAGTGAAGCCTGTGTCCTTGGAGAAATTGATGTCAATGTCAAAATTGAATGATGTTGAAGATGATGATAATAATAATGAACATTATTGTTCAGTATCAGTGACAATTAAGCATGATCACAACACCAAAAGAGATGAAAAGCAAAGCAACAAAGTGGAGGAGAGTGCGCGAAACCTTGTCCACTTTTTATTGGTTAAGACATCATACAACTGTTTCGTAATTAAAGCAGAGAACCTGTTGTTTGATTACTTCAAACAGAGAATTGTTATTGATAATGATGGTTTATCATCATCATCAAAGGAGCTTGAGATTTGCAAGGTGGCTGAGGATTGGGTTCTTGGGAATCCTCAAGAGTTATATTTGGGTTGGGAAGTGAAGAAAGGAAGAGAATTGTACATTAGGGAGATGGAAAAATGTTTGGAGTGGAGAAACAATGATACTCATCAACAAGTACAGCATTTGGCCATTGAGCTTGAAACTGAGGTCTTCACTACTTTGATTAATGAGCTTCTACTTGATCTCTGGATTTGCTAG 1449 0.4458 MQSMIKSKKHVARPNSLLLKDYLMRDDLSSCSSNGFKSFPRRQCCSTAVGFLVAEKDLKRCNRRRRRSRRNSTTTTTTLLLAPRSSSFSSSSSSSSVLQRASEAVIKAIKSLPHKSSGRSKKDGSGSVFSRSFSRKLLSRSFWRKAEVAKEEEGTGSTQRWIRTSFRELLMQDSHKTASLNEDTAFTSNAATTTTTTTTCSSSSSSSSSGCGSNSSWGESEFTFSSSSAASSSSIGSGENDVAQVTKDPPPPTGKIHHETTRDWPNEEKEQLSPVSVLDCPFEDDNEGTEQKRMQQKRRHFKAMASVKPVSLEKLMSMSKLNDVEDDDNNNEHYCSVSVTIKHDHNTKRDEKQSNKVEESARNLVHFLLVKTSYNCFVIKAENLLFDYFKQRIVIDNDGLSSSSKELEICKVAEDWVLGNPQELYLGWEVKKGRELYIREMEKCLEWRNNDTHQQVQHLAIELETEVFTTLINELLLDLWIC 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90820g00002 482 MobiDBLite consensus disorder prediction 193 213 - -
Stsc90820g00002 482 PANTHER OS04G0572500 PROTEIN 12 479 - -
Stsc90820g00002 482 MobiDBLite consensus disorder prediction 228 289 - -
Stsc90820g00002 482 MobiDBLite consensus disorder prediction 252 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90820g00002 Stsc-Chr90820 14641 18734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90820g00002 29 479 TRM (TON1 Recruiting Motif) Superfamily AT4G11780 31.440 8.23e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90820g00002 - - ahf:112803960 597.045